Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00685 ATGTTGCAGTTTCAGTTCTTCGTCTTCTTCTCTGCGGTTGTCTTCCTCTCCAACGAAGGTTTTTCACAGCCACACGAGTTCTTTTACCCTGGATTCAAAGAGGTGGAACCTGGATTGAGCTTCTACGGAACGGTGCAGAATGAAAATGGTATTTTGAGGTTAACCAACGACACGGCTCGATTAGTGGGTCGCGTATTTTATGCTTTTCCTTTTCAGTTCAAGAATTCCTCCAACGGCAGAGTTTTCTCTTTCTCTTCTTCGTTTGTTTTTGGTATAGTTCCTCAATATCCCGATCTCGGCGGCCATGGACTTGCTTTCATTGTTGCTCCATCGAAGGATTTTGAAGCTTTGCCCAGTCAATATTTGGGTCTCATGAACGACAGCGACCGGGGTAATTCATCCAAGCATCTCTTCGCCGTTGAGTTCGACACTGTTCAGAACGATGAGTTCGGCGATATCAACGATAATCATGTCGGAATCAACATTAACGATTTGCGTTCGAATGCGTCGGCCCCCGTAGGTTATTTCTCCGATGAGTTTACGAAACATGATCTGCATCTGATTAGTGGAAAAGCCATTAAAGCTTGGATTGATTACGATTCCGAGACATTTGTTTTAAACGTGACGATTTCTCCATCGTCGAGAAAACAATCCAGGCCGATTTTATCATTCAAGGTAGATTTATCGCCGACTTTGAAGGAATACATGTATGTTGGATTCTCCGCTGCCACTGGTTTGCTTACTAGCTCTCACTATATTCAAGGGTGGAGCTTCAAGATGAACGGACAAGCCCAAGAGCTCGATTTGTCCTCTCTTCCTCCGCTTCCAGCTCCAGATGGAGAAACCCAGAAAAAGAATACACCTTTAATTATAGGATTTTCTTTAGTTTCGGCCATTCTAATCCTAGTTTTCGCTGTGATTATTGTTGTTTATCTTGTGAGAAAAATCAAGAACGCTGATACAATTGAGCCATGGGAACTTCAAATGGGCCCACATAGATACTCCTACAAAGAGCTTAAGAAAGCGACAAAAGGTTTTAGAGACAAAGAGCTTCTTGGCTATGGCGGATTCGGAAGAGTCTATAAAGGAATTTTGCCGAATGAAAAAACCCAAATTGCAGTCAAAAAAATCTCCCGAGAATCAAAACAGGGTTTGCGAGAATTCCTCTCCGAAATCGATACCATTGGCCGCCTTCGACACCGGAACTTAGTTCAACTTCTAGGATGGTGCCGCCGGAGAGGTGATCTTTTAATAGTATACGAGTTCATGGCGAACGGAAGCTTGGATAAGATCCTTTTCGACAGCCCTACGACAATATTGAGTTGGGAGCAGCGATTCAAGATCATAAAGGACGTCGCATCAGGACTTCTGTACTTACACGATGGGTTTGAACGGGTGGTTATTCACAGAGACGTAAAAGCAAGCAACATCTTACTCGACGGCGAGTTAACCGGAAAAGTTGGAGATTTTGGGTTAGCTAGAATGTTCGAACACGGTTCTAATCCTAGCACGACGAAGGTCGTCGGCACTTTAGGCTATCTAGCGCCGGAGCTACCGAGAACGGGGAAAGCCACAACCAGTACAGACGTATTCGCGTTCGGAGCTCTACTGCTTGAAGTTGCGAGCGGAAGAAGACCCATCGAACAAAAAGCCATGCCGGAGGAGCTAGTTTTGGTGGATTGGGTGTTCGATAAGTACAGAGAAGGTGCCATTTTCGACGTGGTTGATCGGAATCTCAACAATGAGTACGACAAGGTTGAAATGGCACTGGTTTTGAAGCTGGGGCTGATGTGCTCTAGCAATTCGCCTGCTGCTCGGCCGAGCATGAGGGAGGTGGTAAGGTATTTGGACGGGGTGATTAGTTTGCCCGACGAGTTGAGTTGCGCCTGTGGGTACGAGTATGACGTATGGAAGAGCGGGCACGGCGACGGGTTCGATGATTTGATCAACTGTTTTGCGTCTTCTTCATCCACTCCAACGACCTTTCTCTCCTTCACTGCAAATAGAGACGTGCACCCCAGCTTTGCTTCTCTATCAACTTCTTCAGGGCCACTTCTGCTGTAG 2064 45.93 MLQFQFFVFFSAVVFLSNEGFSQPHEFFYPGFKEVEPGLSFYGTVQNENGILRLTNDTARLVGRVFYAFPFQFKNSSNGRVFSFSSSFVFGIVPQYPDLGGHGLAFIVAPSKDFEALPSQYLGLMNDSDRGNSSKHLFAVEFDTVQNDEFGDINDNHVGININDLRSNASAPVGYFSDEFTKHDLHLISGKAIKAWIDYDSETFVLNVTISPSSRKQSRPILSFKVDLSPTLKEYMYVGFSAATGLLTSSHYIQGWSFKMNGQAQELDLSSLPPLPAPDGETQKKNTPLIIGFSLVSAILILVFAVIIVVYLVRKIKNADTIEPWELQMGPHRYSYKELKKATKGFRDKELLGYGGFGRVYKGILPNEKTQIAVKKISRESKQGLREFLSEIDTIGRLRHRNLVQLLGWCRRRGDLLIVYEFMANGSLDKILFDSPTTILSWEQRFKIIKDVASGLLYLHDGFERVVIHRDVKASNILLDGELTGKVGDFGLARMFEHGSNPSTTKVVGTLGYLAPELPRTGKATTSTDVFAFGALLLEVASGRRPIEQKAMPEELVLVDWVFDKYREGAIFDVVDRNLNNEYDKVEMALVLKLGLMCSSNSPAARPSMREVVRYLDGVISLPDELSCACGYEYDVWKSGHGDGFDDLINCFASSSSTPTTFLSFTANRDVHPSFASLSTSSGPLLL 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6736610 6738673 + Bma019180.1 Bma04g00685 81054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00685 687 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
Bma04g00685 687 CDD STKc_IRAK 352 618 - -
Bma04g00685 687 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 7 662 - -
Bma04g00685 687 Pfam Legume lectin domain 26 272 IPR001220 GO:0030246
Bma04g00685 687 ProSitePatterns Protein kinases ATP-binding region signature. 352 376 IPR017441 GO:0005524
Bma04g00685 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 278 IPR013320 -
Bma04g00685 687 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246
Bma04g00685 687 Gene3D - 24 271 - -
Bma04g00685 687 PANTHER - 7 662 - -
Bma04g00685 687 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00685 687 SUPERFAMILY Protein kinase-like (PK-like) 328 625 IPR011009 -
Bma04g00685 687 Pfam Protein tyrosine and serine/threonine kinase 349 616 IPR001245 GO:0004672|GO:0006468
Bma04g00685 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Bma04g00685 687 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00685 687 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01856 Bma-Chr1:68080562 Bma04g00685 Bma-Chr4:6736610 0 dispersed
Bma02g00650 Bma-Chr2:17988520 Bma04g00685 Bma-Chr4:6736610 0 dispersed
Bma04g00685 Bma-Chr4:6736610 Bma10g00280 Bma-Chr10:2521552 8.37E-172 dispersed
Bma10g01174 Bma-Chr10:41329725 Bma04g00685 Bma-Chr4:6736610 1.55E-16 dispersed
Bma14g02140 Bma-Chr14:45893560 Bma04g00685 Bma-Chr4:6736610 1.01E-116 dispersed
Bma04g00680 Bma-Chr4:6639812 Bma04g00685 Bma-Chr4:6736610 6.65E-165 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66450 PF07714 PK_Tyr_Ser-Thr 1.90E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00685 - - jre:109006813 871.307