Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00727 ATGGAAGAGTCTTTCAAACCTTTTCAAGGAATCAAGAACGATCTGCAAGGAAGATTGAAGTGCTACAAACAAGACTGGAGTGGAGGTTTCAGTTCGGGTTTCCGGATCTTGGCTCCCACCACATACATATTTTTTGCATCAGCAATTCCCGTTATTTCATTCGGAGAACAATTGGAAAGAGATACAGTTAGCTATTTCTCACTCTCGGTGTTGACAGATGGAGTTCTCACAGCAGTTCAAACATTAGCTTCTACTGCATTATGTGGAATTATACACTCAGTTATAGGAGGTCAGCCTTTGTTGATTCTCGGTGTCGCAGAGCCTACTGTCCTTATGTACACTTTCATGTTCAATTTTGCTAAAGATCGACCAGAACTGGGATCGAAGCTTTTTCTAGCCTGGGCCGGATGGGTATGTGTATGGACTGCATTATTGCTTTTCCTGTTGGCTATATTAGGTGCTTGCTCCATTATCAATAGATTCACTCGTGTTGCGGGAGAGCTGTTTGGCCTTCTCATTGCAGTGCTTTTCATGCAACAAGCTATCAAAGGAATCGTGGATGAGTTTGGTATACCAGAAAGGGAAAATCCAAAACTAACTGAGTTTCAGCCTTCATGGAGATTTGCAAATGGGATGTTTGCTTTGGTTCTCTCATTTGGTCTGCTGCTTACTGGATTAAAAAGCAGAAAGGCTCGGTCTTGGCGTTATGGATCTGGTTGGATGCGAGGCTTCATTGCTGATTATGGCGTCCCTCTGATGGTATTGGTATGGTCAGCCATTTCCTATCTACCATCTGGAAATGTTCCCGCAGGAATTCCAAGGCGTCTCTTCAGTCCAAATCCATGGTCTGTCGGTGCATATGATAATTGGACAATTATCAAGGCATCAATGAAACTAAATACTATAACTTCACAGGAAATGCTAAATGTGCCGGTTCTTTACATAGTGGGAGCTTTCATTCCAGCGACGATGATTGCCGTGCTATACTATTTTGACCACAGTGTAGCTTCTCAACTTGCTCAGCAAAAGGAATTTAACTTGAGAAAGCCGCCTTCTTTCCATTATGATTTGCTTCTTTTGGGGTTCATGGTTATCTTGTGTGGGCTAACTGGGATTCCTCCAGCAAACGGTGTCATTCCTCAGTCTCCCATGCATACAAAAAGTCTGGCTACACTGAAGCATCAGTTACTCCGCCGTCGCCTTGTGGTAGCAGCACGGAAAGGTATGAAAGAAAATGCAAGCTTGGAGCAAGTGTATCAAAGTATGCAAGAAGCCTACCAACAAATGCAGACCCCGTTGTTTGGCCAGGAACCTTCAGCACATGGATTAAAGGAAATGAAAGAATCAACAATCCAAATCGCTTCTAGTACTGGAAACAGAGATGCCTCAATTGATGACACTGTGATTGACGTTGAGAAAGAGATTGATGACTTGTTGCCGGTTGAGGTGAAAGAACAACGGCTCAGTAACTTGCTTCAAGCTACAATGGTGGGAGCATGTGTTGCAGTCATGCCCTTCATTAAAAAAATCCCGACCTCCGTACTTTGGGGCTATTTTGCTTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTTTGGGAAAGGATTCTATTGCTTTTCACAGCTCCAAGCAGACGATACAAGGTTCTAGAGGATTCCCATGCCACTTTTGTGGAGACAGTTCCTTTCAAGACAATTGCCATGTTTACGGCTTTTCAGACTGCTTACTTGTTGGTTTGTTTTGGGATTACATGGGTTCCCATAGCTGGACTTCTGTTCCCCTTAATGATCATGCTTTTGGTTCCTGTGAGACAATACATTTTGCCCAAGTTTTTTAAAGGGGTTCACCTCCAAGATTTAGATGCCGCCGAATATGAAGAGGCTCCGGTGCTTTCCTTCAACCTTACTCGTGTGAGAGAGATGGGGAGCAATGCATCATTTGCTGACAGTGGAGAAATGTTTGATGGTATAATCACTCGAAGCCGAGGAGAGATAATACGCACGTGGAGTCTCAAGATACCGAGCTCCCCTGCAACACCGAGAGGAACAAAAAGTCCAGACGTCAATCAGAGTCCTCGAGTTGTAAGACGAAGTCCTTTGAGTACAATGGGTGCAGACTAA 2121 44.04 MEESFKPFQGIKNDLQGRLKCYKQDWSGGFSSGFRILAPTTYIFFASAIPVISFGEQLERDTVSYFSLSVLTDGVLTAVQTLASTALCGIIHSVIGGQPLLILGVAEPTVLMYTFMFNFAKDRPELGSKLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAVLFMQQAIKGIVDEFGIPERENPKLTEFQPSWRFANGMFALVLSFGLLLTGLKSRKARSWRYGSGWMRGFIADYGVPLMVLVWSAISYLPSGNVPAGIPRRLFSPNPWSVGAYDNWTIIKASMKLNTITSQEMLNVPVLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLTGIPPANGVIPQSPMHTKSLATLKHQLLRRRLVVAARKGMKENASLEQVYQSMQEAYQQMQTPLFGQEPSAHGLKEMKESTIQIASSTGNRDASIDDTVIDVEKEIDDLLPVEVKEQRLSNLLQATMVGACVAVMPFIKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDSHATFVETVPFKTIAMFTAFQTAYLLVCFGITWVPIAGLLFPLMIMLLVPVRQYILPKFFKGVHLQDLDAAEYEEAPVLSFNLTRVREMGSNASFADSGEMFDGIITRSRGEIIRTWSLKIPSSPATPRGTKSPDVNQSPRVVRRSPLSTMGAD 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7598757 7603474 - Bma019235.1 Bma04g00727 81096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00727 706 Pfam HCO3- transporter family 481 571 IPR011531 GO:0006820|GO:0016021
Bma04g00727 706 Pfam HCO3- transporter family 211 394 IPR011531 GO:0006820|GO:0016021
Bma04g00727 706 Pfam HCO3- transporter family 7 189 IPR011531 GO:0006820|GO:0016021
Bma04g00727 706 MobiDBLite consensus disorder prediction 673 706 - -
Bma04g00727 706 Gene3D Helical hairpin bin 18 60 - -
Bma04g00727 706 PANTHER BORON TRANSPORTER 3-RELATED 1 681 - -
Bma04g00727 706 MobiDBLite consensus disorder prediction 673 697 - -
Bma04g00727 706 PANTHER ANION EXCHANGE PROTEIN 1 681 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00032 Bma-Chr2:339255 Bma04g00727 Bma-Chr4:7598757 0 dispersed
Bma04g00727 Bma-Chr4:7598757 Bma13g00097 Bma-Chr13:1024438 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00727 K24194 - tcc:18603732 1117.45