Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00769 ATGGGTAATGCGGACTGCGAGAGTTTCAAACATGGAGTCCAAATTCCTCCATCCAAACCATTTCTAGAGTCTCTCAAATCGACACTGAAAGAGACTCTATTTCCTGATGATCCTTTCAGACAGTTCAAGAATCAGCCATTCTCCAGGAAGATCTTTCTCGGACTTCAGTACTTCGTGCCGATTGTTGAATGGGGTCCTCGCTATTCTTTTCAATTCTTCAAGAGTGATGTTGTTTCGGGAATCACCATTGCCAGTTTGGCTGTTCCACAGGGTATAAGCTATGCGAATTTGGCGAGTATTCCTGCAATTATTGGACTCTATTCAAGCTTTGTTCCTCCCTTCATTTATGCGATGCTTGGAAGTTCAAAGGATATTGCTGTAGGAACTATTGCAGTTGTGTCTCTTCTCATGACTGCCATGCTCGGAAAAGTTGTTAACCCTAAGCGGAACCCCGTCGAGTATGTTCACTTGGTTTTCACTGCAACTTTCTTTGCTGGTGTCTTTCAAGCTGCCCTTGGCTTCTTAAGGCTAGGGTTTGTGGTGGATTTTCTATCTCATGCGACAATAGTAGGTTTCATGGGAGGAGCAGCTACAGTTATATGTCTGCAACAGCTGAAAGGGATTCTTGGTTTAGTTCATTTCACTCATGAAACTGATATTGTATCAGTCTCAACATCTATTTTCTCCCAACTTCACCACTGGAGGTGGGAGACTATCATCATGGGCTGCTGCTTTCTTTCCTTCCTCGTCGTCTCCAGAATATACAGCAAGAAGAAGCAGGTGTTCTTCTGGATAAACGCTTTGGCTCCATTGATATCTGTGATTCTTGGAAGCCTTTTTGTCTATCTCACTCGTGCTGAGAAGCATGGCGTTCAAGTTATTGGAGAGCTGAAGAAGGGACTAAATCCAATTTCGTTGACTGACTTGGCATTTGGGTCACCATATCTAACTACTGCTATCAAAACTGGGATCATCTCTGGCACCATCGGCCTTGCTGAAGGAGTTGCAGTGGGAAGAAGCTTTGCCACATTTAAGAACTACCACATCGATGGCAATAAAGAGATGATAGCTTTTGGGATGATGAACATCATAGGCTCTTTCACTTCTTGCTACCTAACTGGAGGACCATTCTCACGCACAGCGGTGAATTTTAATGCGGGATGCAAAAGTGCGATTTCAAATATTGTTATGGCATTTGGAGTGATGATGACTTTGTTATTTTTGACACCACTCTTCTATTACACTCCTCTTGTGGTGCTCTCTACTATAATCATCACTGCAATGCTAGGTCTAATAAACTACGAAGCTGTCATCCATCTTTGGAAGGTAGACAAATATGATTTTACGGTCTGTGTTAGTGCATATGTTGGCGTCGTTTTCGGGAGCATCGAAACCGGCTTAGTTGTAGCAGTTTCACTTTCCATGCTAAGAGTAGTCATGTCTGTGGCAAGACCAAAGACTCTCACACTAGGAAACATCCCCAATTCCACAATTTACAGAAGTACAAATCAATACCCAAATACAGATTCTGTACCTGGAATTCTTATTCTGCAAATCGATGCACCAATCTACTTTGCCAACGCAAACTACCTCAGAGAAAGGGTCTTGAGGTGGATCTCCGAGGAGGAGGATCGACTCAAGTGTTTGGAAAAAACCAGCTTACAATATGTTATTATAGATACAAGCGTTGTTAGCAGCATTGATACTAGCGGGATTAGCTTTCTCGAAGAACTAAAGAATAATGTTGAAAGGAAAGACATCAAGCTCGTGCTCGCAAATCCACAAAGTGAAGTTATAAAAAAGCTGGTTAAGAGCAACTTCATTGAGACAATAGGGGAGGAGTGGATCCATCTCACCGTGGGAGAAGCCGTCGCCGCATGCAGCTTTATGCTTCACACATCGAAGGCAGACCATCCTTCAGCTGAAGTTGTCGCAAGTAATGACATAATTTAA 1953 42.91 MGNADCESFKHGVQIPPSKPFLESLKSTLKETLFPDDPFRQFKNQPFSRKIFLGLQYFVPIVEWGPRYSFQFFKSDVVSGITIASLAVPQGISYANLASIPAIIGLYSSFVPPFIYAMLGSSKDIAVGTIAVVSLLMTAMLGKVVNPKRNPVEYVHLVFTATFFAGVFQAALGFLRLGFVVDFLSHATIVGFMGGAATVICLQQLKGILGLVHFTHETDIVSVSTSIFSQLHHWRWETIIMGCCFLSFLVVSRIYSKKKQVFFWINALAPLISVILGSLFVYLTRAEKHGVQVIGELKKGLNPISLTDLAFGSPYLTTAIKTGIISGTIGLAEGVAVGRSFATFKNYHIDGNKEMIAFGMMNIIGSFTSCYLTGGPFSRTAVNFNAGCKSAISNIVMAFGVMMTLLFLTPLFYYTPLVVLSTIIITAMLGLINYEAVIHLWKVDKYDFTVCVSAYVGVVFGSIETGLVVAVSLSMLRVVMSVARPKTLTLGNIPNSTIYRSTNQYPNTDSVPGILILQIDAPIYFANANYLRERVLRWISEEEDRLKCLEKTSLQYVIIDTSVVSSIDTSGISFLEELKNNVERKDIKLVLANPQSEVIKKLVKSNFIETIGEEWIHLTVGEAVAACSFMLHTSKADHPSAEVVASNDII 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8332668 8337859 + Bma019290.1 Bma04g00769 81138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00769 650 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Bma04g00769 650 PANTHER BNAA04G05880D PROTEIN 9 642 IPR030311 GO:0008272|GO:0009507|GO:0015116
Bma04g00769 650 CDD STAS_SulP_like_sulfate_transporter 505 620 - -
Bma04g00769 650 TIGRFAM sulP: sulfate permease 60 623 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma04g00769 650 Pfam STAS domain 505 623 IPR002645 -
Bma04g00769 650 ProSiteProfiles STAS domain profile. 504 627 IPR002645 -
Bma04g00769 650 Gene3D STAS domain 484 629 IPR036513 -
Bma04g00769 650 PANTHER SULFATE TRANSPORTER 9 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma04g00769 650 SUPERFAMILY SpoIIaa-like 505 627 IPR036513 -
Bma04g00769 650 Pfam Sulfate permease family 73 453 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00769 Bma-Chr4:8332668 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma04g00769 Bma-Chr4:8332668 Bma04g00771 Bma-Chr4:8406830 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00769 K17471 - csv:101203205 981.474