Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00794 ATGACTATGGCGATGCTCTTGAGCATTGTCCTTGTCGTCATCCTTATGCTGCTTCTGATTCTCATCATCATCCTCTTCGCCTGCAAGCCATGGCGCTTTCTTTCCACTTCTCGTTCGCGTACGCTCAAGGCCTCTGACCTTGAGAGGCCCCTTGTCGAAGACAATGTGGATCCTCAAGATCAAAGCAACGAACTTCCAAGAGATTATGATTTGGAGGGAGCTTTTCAATCTGATGTGCATTACCGCTCCGCCGGAGCGCATGGACTCATTTACAAACAAAGGCTTCAAGCTGCATCTCCAGATGTATATGCAGATTCTTTAGAAGACATTTCTGTTGGCCAGACACTTAAACGTCCATATGATGCACACCAGATTTCAGAAATCCAAAGACCTAGTAAGAGTGTTGGAAATGAAAAATCTGAAGAGTCCTCGGGAAAGGATATCTTACACGAAAGAAGTCGCATTTCTTTGGAGGTTATTTCTGGTCCTTCTCGCGGACTTAGATCTTTCATACATTCATCAAGTACCTCTAGGCTTCCACTAACTCTTGGAAGGGTTTCTCCTAGTGATATTGTACTGAAGGATTCAGAGGTCTCAGGAAAGCATGCATTAATAAATTGGAATTTAAATAAAATGAAATGGGAGCTGTTAGACATGGGTAGCCTGAATGGAACACTGCTTAATTCTCAACCGATACACCATCCTGACTCTGGAAGTAGGCATTGGAGTGATCCTACTGAACTTGCGAGTGGAGATATAATAACACTTGGTACAACCTCAAAAATATATGTTCATATAACGTCTCAAACTGAGGGTATAATTCCATTTGGAGTTGGTGTGGCTTCTGATCCCATGGCTATACGTCGAGGAGGAAAAAAATTGGTTATGGAAGATGTCTTTTATTATAAGTGGCCTCTTCCTGGAATCAATCAGTTGGGAATATTTGGGATTTGTGATGGTCATGGTGGATCAGCAGCTGCCAAAAGTGCTAGCGAAATTCTACCTGAGATGGTTGCCACTATTTTATCTGATTCTCTAAGAAGGGAACGGGTATTTTCCCTATGTGACGCTTCAGATGTTTTAAGGGATGCATTTTCTCGGACAGAAGCGTGCATGAATCACCACTATGAGGGTTGTACTGCAACCTTGCTTCTGGTATGGGTGGATGGTAATGATAATTACTTTTTGCAATGCGCAAATGTTGGTGATTCTGCTTGTGTTTTAAGTGTTGATGGGAAACAAGTAAAGATGACTGAAGATCATAGAGTTACTAGCTACCCAGAACGACAACGAATTGAAAAATTAGGAAAGCCATTGAAAGATGGGGAGACACGATTATGTGGTTTGAACCTTGCACGGATGCTTGGAGACAAATTTCTGAAACAACAGGATAATCGCTTCAGTTCAGAGCCTTACACAAGTCAAGTTGTACATATTGATCAAGCAAGCAGGGCATTTGCACTCATGGCAAGTGATGGCTTTTGGGATGTCATCAGCGTCAAGAAGGCAATCCAGCTAGTTCTTCAGGCTCAGGAGAGATACTCTACAGATTCAGAAAATTGGGCGGAGAAGATAGCTAATTTTTTGTTGGCCGAGGCTAGAATGCTACGAACAAAGGATAATACCACTATAATTTACTTAGATTTTGACTTCTCTCATAGAAACTCTTGTAAAGTTGAATCATAA 1686 41.87 MTMAMLLSIVLVVILMLLLILIIILFACKPWRFLSTSRSRTLKASDLERPLVEDNVDPQDQSNELPRDYDLEGAFQSDVHYRSAGAHGLIYKQRLQAASPDVYADSLEDISVGQTLKRPYDAHQISEIQRPSKSVGNEKSEESSGKDILHERSRISLEVISGPSRGLRSFIHSSSTSRLPLTLGRVSPSDIVLKDSEVSGKHALINWNLNKMKWELLDMGSLNGTLLNSQPIHHPDSGSRHWSDPTELASGDIITLGTTSKIYVHITSQTEGIIPFGVGVASDPMAIRRGGKKLVMEDVFYYKWPLPGINQLGIFGICDGHGGSAAAKSASEILPEMVATILSDSLRRERVFSLCDASDVLRDAFSRTEACMNHHYEGCTATLLLVWVDGNDNYFLQCANVGDSACVLSVDGKQVKMTEDHRVTSYPERQRIEKLGKPLKDGETRLCGLNLARMLGDKFLKQQDNRFSSEPYTSQVVHIDQASRAFALMASDGFWDVISVKKAIQLVLQAQERYSTDSENWAEKIANFLLAEARMLRTKDNTTIIYLDFDFSHRNSCKVES 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9035602 9041273 - Bma019319.1 Bma04g00794 81163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00794 561 CDD FHA 154 268 IPR000253 GO:0005515
Bma04g00794 561 CDD PP2Cc 276 549 IPR001932 -
Bma04g00794 561 ProSiteProfiles Forkhead-associated (FHA) domain profile. 181 232 IPR000253 GO:0005515
Bma04g00794 561 MobiDBLite consensus disorder prediction 121 148 - -
Bma04g00794 561 Pfam Protein phosphatase 2C 289 541 IPR001932 -
Bma04g00794 561 SUPERFAMILY PP2C-like 290 550 IPR036457 -
Bma04g00794 561 Pfam FHA domain 182 257 IPR000253 GO:0005515
Bma04g00794 561 PANTHER PROTEIN PHOSPHATASE 2C 35 560 IPR015655 GO:0004722|GO:0006470
Bma04g00794 561 MobiDBLite consensus disorder prediction 134 148 - -
Bma04g00794 561 SMART FHA_2 180 232 IPR000253 GO:0005515
Bma04g00794 561 ProSiteProfiles PPM-type phosphatase domain profile. 277 549 IPR001932 -
Bma04g00794 561 Gene3D - 283 556 IPR036457 -
Bma04g00794 561 SUPERFAMILY SMAD/FHA domain 154 265 IPR008984 GO:0005515
Bma04g00794 561 Gene3D - 150 282 - -
Bma04g00794 561 ProSitePatterns PPM-type phosphatase domain signature. 314 322 IPR000222 GO:0043169
Bma04g00794 561 PANTHER PROTEIN PHOSPHATASE 2C 70 35 560 - -
Bma04g00794 561 SMART PP2C_4 271 547 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00794 Bma-Chr4:9035602 Bma01g02182 Bma-Chr1:78713791 2.29E-20 dispersed
Bma04g00794 Bma-Chr4:9035602 Bma04g00107 Bma-Chr4:839888 1.43E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00794 K01090 - mnt:21390736 782.326