Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g00795 | ATGAGTACAAACCAGGCAGCCAATAGCAGCGCCGGATCAGGCGGCAGTGGTAGCTCCGGATCAGGCGGCGGAGGTCCTTGCGGAGCTTGTAAGTTTCTGCGCAGAAAGTGCGTGCAGGGGTGCATATTCGCTCCGTACTTCGATTCAGAGCAAGGCGCCGCTCATTTCGCAGCGGTTCACAAGGTGTTCGGCGCAAGCAATGTGTCCAAGCTCCTACTACATCTTCCAGTCAACAAGCGACTCGATGCTGTCATAACCATTTGTTACGAGGCTCAAGCTCGCTTAAGAGATCCTGTTTATGGCTGCGTCTCTCACATCTTTGCCCTTCAACAGCAGGTAGTGAATCTACAAGCTGAGCTCTCGTACTTACAAGCACAGCTTAGCAACCCTCGAGCTCCCGTTGCCGCCTCCACCGCCTCCGCCTCCGCCATCTCTACTCACTCCGCTGCCGCTCTCCATCGCCAACCTCCCTTCGTCTGCCTCCATTCCCGCCTCGTATGA | 501 | 56.09 | MSTNQAANSSAGSGGSGSSGSGGGGPCGACKFLRRKCVQGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHLPVNKRLDAVITICYEAQARLRDPVYGCVSHIFALQQQVVNLQAELSYLQAQLSNPRAPVAASTASASAISTHSAAALHRQPPFVCLHSRLV | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9060705 | 9062311 | + | Bma019320.1 | Bma04g00795 | 81164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g00795 | 166 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bma04g00795 | 166 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 143 | - | - | |
Bma04g00795 | 166 | Coils | Coil | 106 | 126 | - | - | |
Bma04g00795 | 166 | ProSiteProfiles | LOB domain profile. | 25 | 127 | IPR004883 | - | |
Bma04g00795 | 166 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 18 | 1 | 143 | - | - | |
Bma04g00795 | 166 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bma04g00795 | 166 | Pfam | Lateral organ boundaries (LOB) domain | 26 | 124 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00795 | Bma-Chr4:9060705 | Bma05g01116 | Bma-Chr5:49931362 | 2.83E-63 | dispersed | |
Bma05g01128 | Bma-Chr5:50271815 | Bma04g00795 | Bma-Chr4:9060705 | 1.62E-67 | transposed | |
Bma04g00795 | Bma-Chr4:9060705 | Bma05g01115 | Bma-Chr5:49926679 | 1.09E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57195 | PF03195 | LOB | 1.60E-38 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g00795 | K21994 | - | tcc:18614288 | 213.386 |