Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00797 ATGGAGCAAATCACAGCAAACGACCGATCGCTTCCGCCTCCTTTTCTCTCCAAAGATCTCCATCTATATCCCTACCATCAATTTCAAAACCCACAGCAGAATTATTCCGATGAGAAGTATTCTGGTGGCGAAAGCAAAGAGCTTGGCGGAAGTGACGCCGGAGACGGAGAGATTATCAAAAGATCACGCGGCCGACCTGCTGGTTCTAAGAACAAACCTAAGCCACCGATCGTAATCACGCACGACAGTGCAAACGCTCTCCGATCACATGTCATGGAGATCGCTGCCGGTTCCGACGTGGTGGAGACGATGTCAGACTTCGCACGCCGGAGACAGCGGGGGGTTTGTATTTTGAGCGGAGGTGGGACAGTAAGCGACGTCACTTTAAGGCAGCCAGCTGTTACTTTACGCGGTGAATTCGAGATTCTTTCTTTGTCAGGATCGTTTTTGCCGCCGCCGGCTCCTGCCGAGGCCTCCGGACTAGCTGTGTATTTGGCAGGAGGACAAGGGCGAGTGGTCGGAGGGTGTGTCGTCGGACCACTTTTAGCTTCCACCCCGGTTGTTATAATGGCGGCTACTTTTGGAAACGCTGCATACGAGAGGCTTTCAATAGAGGAAGATGAATCGCCGATGAAAATCCAGGCGAGCAATCCCGTCGGAAAAGGGCAGCAGCAAAATTTACTAGATCCAGATCCGGACACTTCTCTATTTCATGGAGTTCATCAGAATCTTCTAAATCCACGTGAATTACCTTCTGAAGCATTCTTGCTTTCAAATCGCCCTTCATATTAG 792 50.51 MEQITANDRSLPPPFLSKDLHLYPYHQFQNPQQNYSDEKYSGGESKELGGSDAGDGEIIKRSRGRPAGSKNKPKPPIVITHDSANALRSHVMEIAAGSDVVETMSDFARRRQRGVCILSGGGTVSDVTLRQPAVTLRGEFEILSLSGSFLPPPAPAEASGLAVYLAGGQGRVVGGCVVGPLLASTPVVIMAATFGNAAYERLSIEEDESPMKIQASNPVGKGQQQNLLDPDPDTSLFHGVHQNLLNPRELPSEAFLLSNRPSY 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9100592 9101383 + Bma019323.1 Bma04g00797 81166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00797 263 MobiDBLite consensus disorder prediction 1 78 - -
Bma04g00797 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 263 IPR014476 GO:0003680
Bma04g00797 263 Gene3D - 87 215 - -
Bma04g00797 263 CDD DUF296 88 153 IPR005175 -
Bma04g00797 263 MobiDBLite consensus disorder prediction 216 231 - -
Bma04g00797 263 MobiDBLite consensus disorder prediction 40 64 - -
Bma04g00797 263 ProSiteProfiles PPC domain profile profile. 84 217 IPR005175 -
Bma04g00797 263 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 194 IPR005175 -
Bma04g00797 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 42 263 - -
Bma04g00797 263 MobiDBLite consensus disorder prediction 213 233 - -
Bma04g00797 263 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01149 Bma-Chr2:53432008 Bma04g00797 Bma-Chr4:9100592 1.28E-107 dispersed
Bma04g00797 Bma-Chr4:9100592 Bma02g01165 Bma-Chr2:53776721 1.07E-69 dispersed
Bma04g00797 Bma-Chr4:9100592 Bma05g00788 Bma-Chr5:44846922 1.06E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00797 - - jre:108980480 331.257