Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00927 ATGGGGAAGAAGGGAGGAACTTCGTGGTTGACTGCTGTGAAAAGGGCTTTTAGATCTCCTTCAAAAGACGACGAAGAGAAGAAGAAAGAGAAGAGAAGATGGATTTTCAGAAAATCAACGACTCATCATGAAGCCGAAGCCGTCGACCAGAAAACGCCATTAACAACGAAACTCGAAAAAGGCGCCATTAACAATGGGTCACTAGACTCAACTGCAGATCAAAAACACGCCCTTTCCATTGCAGTCGCCGCCGTCGAGGCGGCTGTTGCTACTGCACAGGCGGCCGCGGAGGAGGTGGCGCGGCTTACCAGACCAATTAATTATCACGCGAGAGAGCATCGCGCAGCCACCGTTATTCAAACTGCATTTCGAGGATATCTAGGAAGGAGAGCATTGCATGCGCTGAGGGGGATCGTGAAGTTGCAGGCTCTGGTGAGGGGCTACAACGTGAGGAAGCAAGCCAAGACGACGCTCAGGTGCATGCAGGCGCTGGTTAGAGTGCAGGCTCGAGTGCTGGACCAGCGACAGAGGCTCTCTCATGAAGGAAGCAGAAAATCTCAGTCCGCCATTAGCGACTTGAGCAGCGCTCTAGAATCGCAGTATCTGCAGGAAATCTGCGACAGAAAATCAGTTTCGCAGTCCCGAAATGGCAGCAGCATTGCAGATGATTGGGATGAGAGAGAAAGAACCATATCTCGCGCTTCTTCTCAACAGAAATGGAGGAGTGGAAGGAGCCCATCAATGGGAACGATGAAGAGTTTCAAGAAGGATCAAAATGGCTAA 783 50.83 MGKKGGTSWLTAVKRAFRSPSKDDEEKKKEKRRWIFRKSTTHHEAEAVDQKTPLTTKLEKGAINNGSLDSTADQKHALSIAVAAVEAAVATAQAAAEEVARLTRPINYHAREHRAATVIQTAFRGYLGRRALHALRGIVKLQALVRGYNVRKQAKTTLRCMQALVRVQARVLDQRQRLSHEGSRKSQSAISDLSSALESQYLQEICDRKSVSQSRNGSSIADDWDERERTISRASSQQKWRSGRSPSMGTMKSFKKDQNG 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12995086 12996542 - Bma019501.1 Bma04g00927 81296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00927 260 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Bma04g00927 260 Pfam IQ calmodulin-binding motif 136 155 IPR000048 GO:0005515
Bma04g00927 260 PANTHER IQ-DOMAIN 5-RELATED 1 232 - -
Bma04g00927 260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 157 IPR027417 -
Bma04g00927 260 MobiDBLite consensus disorder prediction 17 32 - -
Bma04g00927 260 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Bma04g00927 260 PANTHER IQ-DOMAIN 17 1 232 - -
Bma04g00927 260 MobiDBLite consensus disorder prediction 213 260 - -
Bma04g00927 260 SMART iq_5 111 133 IPR000048 GO:0005515
Bma04g00927 260 SMART iq_5 134 155 IPR000048 GO:0005515
Bma04g00927 260 MobiDBLite consensus disorder prediction 220 234 - -
Bma04g00927 260 Gene3D - 109 164 - -
Bma04g00927 260 MobiDBLite consensus disorder prediction 1 32 - -
Bma04g00927 260 MobiDBLite consensus disorder prediction 235 260 - -
Bma04g00927 260 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00927 Bma-Chr4:12995086 Bma02g01259 Bma-Chr2:54615161 6.36E-49 dispersed
Bma04g00927 Bma-Chr4:12995086 Bma07g01423 Bma-Chr7:50036173 4.58E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00927 - - pxb:103956367 272.707