Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00931 ATGATGATTCCGAGAGGTTGTCAAGAGAAAATCACGGAGAAAAGCCAAGAGGAGGTGGATGAAGATGTGGAGGAAGGTTCCTGTGTGGAGGTTGTCCGGTGGGAGAGGTTTCTTCCGAGGATGGTTCTTAGAGTTCTTCTAGTTGAACCTGATGATTCCACGCGTCGGATTATCTCTGCACTTCTTCGTAAATGCAGCTATAGAGTTGCAGCTGTTTCGGATGGACTCAAGGCGTGGGAAACAATAAGGGCAAGACCTCAGAGTATAGATATTATAATGACTGAGGTGGATTTGCCATCAATTTCTGGCTACGCCCTTCTTACTCTAGTCATGGAACATGAAGTTTGCAGAAACATTCCGGTTATAATGATGTCCTCTCAAGATTCAATCAGCACCGTCTTCAAGTACATGATAAAAGGCGCTGGTGACTTTTTCGTTAAACCTATTAGGAGCAATGAGCTGAGGAACATATGGCAGCATGTTTGGCGGAGGCAAAGTCTGCTTGGTGAGAAAACAACTTGTAAAGCTGTGGCATCTTTTGAGAATAAAGCAGCGTGCAATTACTCAAGTGATTGTGCATCACCCAAAAAGAAACATAAAGAATGCAGCGAGAAGGAGGTTGACACCCAAAGCTCTTGCACAATGCCTTACGTGGAAGCTGAGAGTGCATACACCCCAAACATGCTGGACCCTACAAGTCTAAAGAGTCTAAGTTCTTCTTGTTTGAGCAACATGGGAGAGGCAGATCACAATCCTAGTGGTGCATTGGAAAAACAGATGTGCATACTTCGTGGCAGAACTAGAGAAAACTTACATGGAGTAGTGTCAGAGTTTCCATCCTGTGATGAAGTCTATTTTGTTACTCCATCGAGGCGGAAAGAAGACAGGGCTTCCATCCAAGGAATTGACAAGGATGGATTCGCAGGATCAGATATGCTTGTAGAAAATGAATTCTTCAGCAGTGAAGTAATTAGTTGTGATGATGAATGCAATGAACTTCCCTCTAGAGCTATTGACCTGATTGCCACAATTGATATTAAACCAAAGTTCGTAAAAAGAGGTTTTAGTTACGAAAAAGTAGAATCTACTCCTGATTTGGAATTTTCTTTGGGCAAAATGCATCCAAGTTCAAATGCTGAAGGGACTGATGAAATGAAGCCGCTGAACCATTCCAGTGCTTCGGCTTTTTCATTGTATACTAGCCGCAAGATATTTCAGCCTCCTTTTCATGTCCCATCAACCGATACGTATAGACCAGATGGCGGACCTTGTAAATTTAAGGCACCGTCCTTGAATAAAATCTCTGAAAATGAATGCACTTTTCAAACGCAGGTTATGAGTCATGTAGGAAACGGGGCAACCCCGGTACTTGATGATTCTGGTCAAATCGAATTGCCATTTACAGACCCCCAATTTGGAACAGTCCCAGTAGCAGATGGGAAGTTTGACAATGTAGGTGTTGGAGACAATCATGCAGTTCCATCCATGTTTTGTGCTCAATATGGTATACCCACAGGGTGGAATAGCAGACAAGCCTGCAATGAAGGGCCGGGAATCCTTAAACAAGCGGATCCCGAAACTACAAATAACTCAATGGAGCAGAGTGAGGTTGAGAAGAACGTAACAAAGCCTTCAGACCCACCCAGGCATAATTCTCCTGCTGCACCTCACAGTACCAACAGTACTTTATGTAATGAAACTTCAGATTACGACTGGCAGGAGGGAGTTGAGAAGACGGCACCCTTTGAGATTTCAAAAGACGGTCGTTTCTTCAGTCATGAAGGATTCAAAGGGCCTCCCTCTCACTCTCACTCTCACTGCATGAGCCAAAGGGAAGCAGCTTTAACAAAGTTCCGATTGAAGCGTAAAGATAGGTGCTATAGTAAAAAGGTTCGATACCAAAGCAGGAAAAGATTGGCTGAGCAGCGGCCTAGAATAAAGGGGCAGTTCGTGCGACAAATAGAAGCTTACCCACTAACCACTGAAGCAAGGTGTTCATGA 2001 43.93 MMIPRGCQEKITEKSQEEVDEDVEEGSCVEVVRWERFLPRMVLRVLLVEPDDSTRRIISALLRKCSYRVAAVSDGLKAWETIRARPQSIDIIMTEVDLPSISGYALLTLVMEHEVCRNIPVIMMSSQDSISTVFKYMIKGAGDFFVKPIRSNELRNIWQHVWRRQSLLGEKTTCKAVASFENKAACNYSSDCASPKKKHKECSEKEVDTQSSCTMPYVEAESAYTPNMLDPTSLKSLSSSCLSNMGEADHNPSGALEKQMCILRGRTRENLHGVVSEFPSCDEVYFVTPSRRKEDRASIQGIDKDGFAGSDMLVENEFFSSEVISCDDECNELPSRAIDLIATIDIKPKFVKRGFSYEKVESTPDLEFSLGKMHPSSNAEGTDEMKPLNHSSASAFSLYTSRKIFQPPFHVPSTDTYRPDGGPCKFKAPSLNKISENECTFQTQVMSHVGNGATPVLDDSGQIELPFTDPQFGTVPVADGKFDNVGVGDNHAVPSMFCAQYGIPTGWNSRQACNEGPGILKQADPETTNNSMEQSEVEKNVTKPSDPPRHNSPAAPHSTNSTLCNETSDYDWQEGVEKTAPFEISKDGRFFSHEGFKGPPSHSHSHCMSQREAALTKFRLKRKDRCYSKKVRYQSRKRLAEQRPRIKGQFVRQIEAYPLTTEARCS 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13096607 13100388 + Bma019506.1 Bma04g00931 81300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00931 666 Pfam CCT motif 611 653 IPR010402 GO:0005515
Bma04g00931 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 13 644 - -
Bma04g00931 666 Pfam Response regulator receiver domain 45 157 IPR001789 GO:0000160
Bma04g00931 666 SUPERFAMILY CheY-like 43 174 IPR011006 -
Bma04g00931 666 Gene3D - 41 199 - -
Bma04g00931 666 MobiDBLite consensus disorder prediction 514 565 - -
Bma04g00931 666 ProSiteProfiles Response regulatory domain profile. 44 162 IPR001789 GO:0000160
Bma04g00931 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 644 IPR045279 GO:0009736
Bma04g00931 666 MobiDBLite consensus disorder prediction 523 538 - -
Bma04g00931 666 ProSiteProfiles CCT domain profile. 611 653 IPR010402 GO:0005515
Bma04g00931 666 SMART REC_2 43 158 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00931 Bma05g01202 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00931 Bma-Chr4:13096607 Bma10g01320 Bma-Chr10:46835309 7.72E-102 dispersed
Bma04g00931 Bma-Chr4:13096607 Bma05g01202 Bma-Chr5:51449544 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57210 PF00072 Response_reg 5.40E-18 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00931 K12130 - qsu:112004762 493.426