Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g00995 ATGGGTTTTATTTCTAGTTGCAGGAGCAGGAGCTTAATTAGTGGCGTCTCTCCTCAGTTTAACGACGACGTTTTGGGTCTCATCGTCTTCAAATCAGACCTCCTAGACCCGTCTGCTTACCTCGAAACCTGGAACGAAGACGACGAGTCACCATGTAAGTGGCGATTCATAGCCTGCAATCCTGAAAATGGTCGAGTTTCCGAGATTTCCCTCGATGGGTTGGGATTATCAGGAAGATTAGGAAGAGGGCTTGAAAAACTACAGTACTTGAAGGTCCTTTCCTTAGCACATAACAACTTTCATGGCGATGTAAGCTCTGAGACTATTCTCCCTTCAAGTCTGCAACGGGTCGATCTTAGTTTCAACAGCTTTTCAGGCCCAATCGCTTCTTTTCTGAGCATGGCGTCGATTAGGTTCTTGGATTTGTCTGAAAACTCATTCTCAGGAAGCATTGAGGATGTTTTGTTTGAAAACTGTAGCTCCCTTCATTTTCTCTCTCTAGCCTCAAACAAGCTTGAAGGGCCTCTTCCCAGCTCACTGTCTGACTGTATTTTGCTGAATACTCTTAACCTGTCAAACAACCATTTTTCTGGGCAGCCAGATTTTTCTTCAGGGATTCGGAAACTGAAAAGGCTGAGGACGTTAGACTTTTCAAATAATGCATTTTATGGGTTTGTTCATCAGGGAATATCATCCTTACACTTCTTGAAAGTTCTTTTCTTACACAAAAACCAGTTTTCAGGACCTTTACCTTCTGATATAGGACTCTGCCCCCACTTGGAAAAATTAGATTTTAGTGATAATCTTTTATCTGGGTCACTCCCTAACTCCATGAGTTTACTGAATTCTCTGAGCTTCATCAGTTTATCGAATAATTCGCTAACGGGCGATTTCCCTCCGTGGATAGGCAGCATGGGAAGGTTAGAATACATCGACTTTTCGAGTAATAATATTGAAGGAGGCCTTCCATCTTCCATGGGAGGCCTGCAATTGCTATCTCATTTGAGTTTGTCGAAAAACAAGCTGTCTGGTGGTATCCCTGCCTCACTAGTTGACTGTAAAAACCTACGTGTGCTTCGATTAGAAGGCAATGACTTCAATGGTAGCGTTCCGGATGGATTGTTTGAGCTTGGTTTGGAGGAGATTGATTTGTCCAATAATCGGCTTATTGGTTCGGTCCCTGAAGGGTCGAGCCAACTCCATCAGTCTCTTCAAACGCTTGATCTATCAAAGAATAGTTTTACTGGAAATTTTCCTGCAGCAATAGGCCAGTTCATCAATTTAAGACACTTGAATTTGTCATGGAACAATCTTGAATCGAAGATTCAGCCAGACCTCGGATTGTTAGATCGACTGTCGGTGCTGGACTTGAGAGGCAATGGCTTATATGGTTCCATTCCGTCAGACATTTGTGATTCAGAGAGCCTGCAAGTTCTTCAACTAGATGAAAATTCACTCACAGGATCAATTCCAGATGAGATTGGAAACTGTTCGTCACTTAACTTGCTGAGCTTATCCGGCAACGATTTGAGTGGATCGATTCCAAAGTCGATTTCGAATTTGAAAAAGCTCAAGATCCTTCAACTCGAACACAATAAATTAAGCGGGGAGATACCGAAAGAGCTGGGAACGTTAAACAACCTTATCGCTTTGAATGTATCGTACAACAGATTGATCGGCAGGCTTCCAGTCGGGGGTATTTTCCAGAGCTTGGACCAGAGTGCTTTAATGGGAAATTTAGGAATTTGCTCTCCTTTACTGAAAGGACCCTGCAAGATGAATGTGTCTAAGCCACTCTTTCTTGATCCAGATACCTATTCAGACCAAATGGGTGGTCACAAGCAAAGAAACCGAAGTTCTGAATCCGAAAACTCAAATCCCCATGTTCTTCTCAGTGTTTCTGCAATTGTAGCCATTGCAGCAGCTATTTTGATTGCTGTTGGAGTGATCGTTATAAGCTTCCTTAACGTTTCGGTACGAAGAAAGCTCGAATTTCTCGAAACGGCCATCGAAAGATCTTCCATGACTTCAAAATCAGGCAATGAACCAACCGGAAAGCTCATTCTGTTCGACTCGGATACATCTCCGGTCACAAATCCCGAGTCGTTACTCAACAAGGCCTCCGAAATCGGTGGCGGAGTATTCGGCACAGTTTACAAGGTTTCGTTGGGAACTAAAGGACCAGTAGTAGCGATTAAGAAGCTCGTTTCATCAAACTCGCCTCCGAATCCCGAAGAATTCGATCGAGAAGTTCGAATTCTGGCCAAGGCAAAGCATCCTAATCTGATATCAGTCAAGGGATACTACTTGAGCCCTCATACACAGCTTTTGCTCTCAGATTACGCCTCCAATGGCAGCCTGCAAGCCCTCCTGCACGAAAGGATTTCTCCGTCACCACCTCTTTCGTGGCCCTTCCGACTGAAGATCATACACAGCACAGCCAAAGGGCTCGCCTATTTACACCATTCCTTCCATCCGCCGATCATTCACTACAGTCTAAGACCGAACAACATCTTGTTCGACGAGAACTACAGCCTAAGGATTTCAGATTTCGGCCATGCAAGGCTTCTGAACAAGCTCAACAAACATGTGATAAACAGCAGATTTCAAAGCACTTGGGGCTATGTTGCGCCAGAATTGGCCTGTCAGAGCTTAAGGGTAAACGAAAAATGTGATGTATATTGCTTTGGAGTGATCATTCTCGAGCTCGTGACTGGTAAAAGACCGGTCGAATACGGAGAAGACAATGTTGTGATACTGAAAGACCATGTTCGGGTTTTGCTCGAGCATGGAAACGTTTTAGACTGTGTCGATCCAAGCATGAGGGAGTTTTCGGAGAATGAGGTGTTGCCTGTTCTTAAACTGGCCCTTGTCTGCACCTCTCAGTTACCTTCTAGCAGGCCTTCAATGGCGGAAGTGGTGCAGATACTAGAGGTTATTCAGTCCCCAGATTCTCAGAGGATGGATTTTGGAAATTCTATGAATCAGAATAGTGATTCTACTTAA 3006 44.08 MGFISSCRSRSLISGVSPQFNDDVLGLIVFKSDLLDPSAYLETWNEDDESPCKWRFIACNPENGRVSEISLDGLGLSGRLGRGLEKLQYLKVLSLAHNNFHGDVSSETILPSSLQRVDLSFNSFSGPIASFLSMASIRFLDLSENSFSGSIEDVLFENCSSLHFLSLASNKLEGPLPSSLSDCILLNTLNLSNNHFSGQPDFSSGIRKLKRLRTLDFSNNAFYGFVHQGISSLHFLKVLFLHKNQFSGPLPSDIGLCPHLEKLDFSDNLLSGSLPNSMSLLNSLSFISLSNNSLTGDFPPWIGSMGRLEYIDFSSNNIEGGLPSSMGGLQLLSHLSLSKNKLSGGIPASLVDCKNLRVLRLEGNDFNGSVPDGLFELGLEEIDLSNNRLIGSVPEGSSQLHQSLQTLDLSKNSFTGNFPAAIGQFINLRHLNLSWNNLESKIQPDLGLLDRLSVLDLRGNGLYGSIPSDICDSESLQVLQLDENSLTGSIPDEIGNCSSLNLLSLSGNDLSGSIPKSISNLKKLKILQLEHNKLSGEIPKELGTLNNLIALNVSYNRLIGRLPVGGIFQSLDQSALMGNLGICSPLLKGPCKMNVSKPLFLDPDTYSDQMGGHKQRNRSSESENSNPHVLLSVSAIVAIAAAILIAVGVIVISFLNVSVRRKLEFLETAIERSSMTSKSGNEPTGKLILFDSDTSPVTNPESLLNKASEIGGGVFGTVYKVSLGTKGPVVAIKKLVSSNSPPNPEEFDREVRILAKAKHPNLISVKGYYLSPHTQLLLSDYASNGSLQALLHERISPSPPLSWPFRLKIIHSTAKGLAYLHHSFHPPIIHYSLRPNNILFDENYSLRISDFGHARLLNKLNKHVINSRFQSTWGYVAPELACQSLRVNEKCDVYCFGVIILELVTGKRPVEYGEDNVVILKDHVRVLLEHGNVLDCVDPSMREFSENEVLPVLKLALVCTSQLPSSRPSMAEVVQILEVIQSPDSQRMDFGNSMNQNSDST 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16141302 16144404 + Bma019600.1 Bma04g00995 81364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g00995 1001 ProSitePatterns Protein kinases ATP-binding region signature. 710 734 IPR017441 GO:0005524
Bma04g00995 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 988 - -
Bma04g00995 1001 SUPERFAMILY Protein kinase-like (PK-like) 706 981 IPR011009 -
Bma04g00995 1001 PANTHER BNAA09G02190D PROTEIN 13 988 - -
Bma04g00995 1001 MobiDBLite consensus disorder prediction 606 625 - -
Bma04g00995 1001 SMART LRR_typ_2 425 448 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 474 497 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 449 473 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 134 158 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 354 377 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 233 257 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 329 353 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 281 305 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 521 545 IPR003591 -
Bma04g00995 1001 SMART LRR_typ_2 209 232 IPR003591 -
Bma04g00995 1001 SUPERFAMILY L domain-like 38 371 - -
Bma04g00995 1001 Gene3D Transferase(Phosphotransferase) domain 1 782 989 - -
Bma04g00995 1001 SUPERFAMILY L domain-like 300 574 - -
Bma04g00995 1001 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Bma04g00995 1001 Gene3D Phosphorylase Kinase; domain 1 692 781 - -
Bma04g00995 1001 Pfam Leucine rich repeat 379 438 IPR001611 GO:0005515
Bma04g00995 1001 Pfam Leucine rich repeat 307 366 IPR001611 GO:0005515
Bma04g00995 1001 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Bma04g00995 1001 Gene3D Ribonuclease Inhibitor 78 328 IPR032675 -
Bma04g00995 1001 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Bma04g00995 1001 ProSiteProfiles Protein kinase domain profile. 704 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00995 1001 Pfam Protein kinase domain 706 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g00995 1001 Gene3D Ribonuclease Inhibitor 19 77 IPR032675 -
Bma04g00995 1001 Gene3D Ribonuclease Inhibitor 332 597 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00995 Bma06g01410 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00194 Bma-Chr3:1487957 Bma04g00995 Bma-Chr4:16141302 0 dispersed
Bma04g00995 Bma-Chr4:16141302 Bma08g01055 Bma-Chr8:49657352 0 dispersed
Bma12g00116 Bma-Chr12:1769373 Bma04g00995 Bma-Chr4:16141302 1.25E-14 dispersed
Bma04g00995 Bma-Chr4:16141302 Bma06g01410 Bma-Chr6:50856720 3.76E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66461 PF00069 Pkinase 8.90E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g00995 - - dzi:111307803 1199.5