Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01103 ATGTCGCGGAAAGGTTTGATGGAACAGGACTTAAGTAAACTGGATGTAACAATGTTGAGTCCAACATCCAAAGAAGTTATATCACGTCAAGCCACCATTAATATTGGCACCATTGGTCATGTGGCACATGGCAAGTCGACAGTTGTTAAAGCAATATCTGGTGTGCAGACAGTTCGTTTTAAGAATGAGCTGGAGCGTAACATCACCATCAAACTTGGATATGCAAATGCAAAGATATACAAATGCGAAGATGATCGATGCCCTCGACCTATGACGTACAAGGCCTATGGAAGTGGAAAGGAAGACAGTCCTTTATGTGATGTGCCTGGGTTTGAAAATTGCAGGATGGAACTTCTAAGACACGTGTCTTTTGTAGATTGTCCTGGTCACGATATTCTCATGGCTACCATGCTTAATGGAGCAGCAATTATGGATGGGGCACTTCTTTTAATAGCTGCAAATGAAAGTTGCCCCCAACCGCAAACTTCAGAGCATTTGGCTGCAGTTGAAATTATGCGCCTCCAACATATTATAATCCTTCAAAATAAAGTAGATCTTATTCAGGAAAATGTAGCCATCAATCAACATGAAGCAATTAAAAAATTTATTAAACAGGGGACTGTAGCTGATAATGCACCTATTGTTCCAATTTCGGCGCAGCTTAAGTATAACATTGACGTTGTGTGTGAATATATAGTGAAAAATATTCCCATTCCGGAGCGAAATTTTGTGTCACCTCCTAACATGATTGTAATTCGATCATTTGATGTCAATAAGCCTGGATTTGAGGTTGATGAAATTAAAGGTGGCGTAGCTGGTGGAAGTATTCTTAGGGGTGTTTTGAAGGTGAACCAATATATTGAGGTTCGTCCTGGAATTGTTGTCAAGGATGAAAGTGGGAATATCAAGTGCACACCAATATATTCAAGAATTGTTTCTTTATATGCCGAACAAAATGAGTTGCAATTTGCAGTGCCAGGTGGCCTCATTGGGGTTGGCACAACCATGGATCCCACTTTGACACGTGCTGATAGATTGGTAGGCCAGGTTCTTGGCGAGGTTCGATCACTCCCTGAGGTTTTTGTTGAGCTTGAGATATTCTTGTACCTTACGCACTATATTTTTTGCAAGGTTAATTTCTTCCTGCTGCGACGGCTGCTGGGTGTGAGAACAAAGGGCTCAGAAAGGCAAGGTAAGGTTTCCAAGCTAGCTAAAGGTGAGATCCTAATGTTAAACATAGGATCTATGTCCACTGGAGCTCGAGTCCTTGCAGTAAAGAATGATCTGGCAAAGCTGCAACTAACTTCTCCGGTTTGTACGAGCAAAGGTGAAAAAATCGCGCTAAGTCGACGAGTTGAGAAGCACTGGCGTCTTATTGGCTGGGGACAGATTCAAGCAGGTACCACCCTTGAAGTTCCACCTTCCCCCATTTGA 1434 42.26 MSRKGLMEQDLSKLDVTMLSPTSKEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMTYKAYGSGKEDSPLCDVPGFENCRMELLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIKKFIKQGTVADNAPIVPISAQLKYNIDVVCEYIVKNIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQYIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVRSLPEVFVELEIFLYLTHYIFCKVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLEVPPSPI 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25732579 25737544 + Bma019796.1 Bma04g01103 81472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01103 477 CDD eIF2_gamma 33 241 IPR044128 GO:0005525
Bma04g01103 477 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 377 465 IPR009001 -
Bma04g01103 477 Gene3D - 30 241 IPR027417 -
Bma04g01103 477 CDD eIF2_gamma_III 358 464 IPR015256 -
Bma04g01103 477 Gene3D Translation factors 371 469 - -
Bma04g01103 477 Pfam Initiation factor eIF2 gamma, C terminal 377 464 IPR015256 -
Bma04g01103 477 Pfam Elongation factor Tu domain 2 269 351 IPR004161 GO:0005525
Bma04g01103 477 PRINTS GTP-binding elongation factor signature 139 150 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 PRINTS GTP-binding elongation factor signature 123 133 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 PRINTS GTP-binding elongation factor signature 177 186 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 PRINTS GTP-binding elongation factor signature 34 47 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 Gene3D Translation factors 243 357 - -
Bma04g01103 477 Pfam Elongation factor Tu GTP binding domain 32 237 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 CDD eIF2_gamma_II 242 354 IPR044127 GO:0000049
Bma04g01103 477 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 30 240 IPR000795 GO:0003924|GO:0005525
Bma04g01103 477 SUPERFAMILY Translation proteins 241 353 IPR009000 -
Bma04g01103 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 243 IPR027417 -
Bma04g01103 477 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 1 476 - -
Bma04g01103 477 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01103 Bma-Chr4:25732579 Bma05g01032 Bma-Chr5:48878058 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01103 K03242 - zju:107433156 863.988