Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01120 | ATGGCGTCATCTCTGATTTTGAATCCAGTGATTAACTCTGATCGTTCTCGAGAATCTTCAAGAAGGAAAAAGAAGAAGAGAACTCAACCGAACAGAGACCATAATCAAGATCAGAGCCCTATCAAATGGAAGTCTGAAGCACAGCAGCAACTCTACTCGTCCAAGCTCGTTCAAGCGCTGAGGCAAGTGAGACTCAGCCATGACACTTCGTCTCCAAACGCAGTTCCTCGCCGCGGCCGCGCTGTACGCGAAGCTGCCGATAGGGTCTTAGCCGTCTCCGCAAGGGGTAAAACTCTATGGAGCCGAGCGATCTTGACGAACCGCTTGAAGCTCAAATTCTCCCAGCGGAAAAGGCAGACAGTCTCCTACGCTGCGAATAACCGTTCAAAGAAGCCTCGAGTGATCGTTTTGCGATTGAAAGGCAAGTCTCTACCAGCGGTTCAGAGAAAGGTTCGGCTACTCGGACGTTTGGTTCCTGGGTGCCGGAAGCAATCGTTTCCGGTGATTCTAGAAGAGGCTACTGATTATATAGCTGCTCTGGAGATGCAGGTCCGTGCACTCGCTCAGTTGCTCTCTGCTTCTGATTCTGGTTCCTCCTCGTCACCGCCGAGCTGA | 615 | 51.38 | MASSLILNPVINSDRSRESSRRKKKKRTQPNRDHNQDQSPIKWKSEAQQQLYSSKLVQALRQVRLSHDTSSPNAVPRRGRAVREAADRVLAVSARGKTLWSRAILTNRLKLKFSQRKRQTVSYAANNRSKKPRVIVLRLKGKSLPAVQRKVRLLGRLVPGCRKQSFPVILEEATDYIAALEMQVRALAQLLSASDSGSSSSPPS | 204 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26808642 | 26809256 | - | Bma019824.1 | Bma04g01120 | 81489 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01120 | 204 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 203 | IPR044660 | GO:0006355 | |
Bma04g01120 | 204 | CDD | bHLH_AtIBH1_like | 136 | 187 | IPR044549 | GO:0006355 | |
Bma04g01120 | 204 | Coils | Coil | 170 | 190 | - | - | |
Bma04g01120 | 204 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 203 | - | - | |
Bma04g01120 | 204 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Bma04g01120 | 204 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 151 | 192 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01120 | Bma-Chr4:26808642 | Bma05g00998 | Bma-Chr5:48461233 | 4.20E-90 | dispersed | |
Bma04g01120 | Bma-Chr4:26808642 | Bma02g00933 | Bma-Chr2:49184765 | 1.96E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01120 | - | - | csin:114308377 | 239.58 |