Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01120 ATGGCGTCATCTCTGATTTTGAATCCAGTGATTAACTCTGATCGTTCTCGAGAATCTTCAAGAAGGAAAAAGAAGAAGAGAACTCAACCGAACAGAGACCATAATCAAGATCAGAGCCCTATCAAATGGAAGTCTGAAGCACAGCAGCAACTCTACTCGTCCAAGCTCGTTCAAGCGCTGAGGCAAGTGAGACTCAGCCATGACACTTCGTCTCCAAACGCAGTTCCTCGCCGCGGCCGCGCTGTACGCGAAGCTGCCGATAGGGTCTTAGCCGTCTCCGCAAGGGGTAAAACTCTATGGAGCCGAGCGATCTTGACGAACCGCTTGAAGCTCAAATTCTCCCAGCGGAAAAGGCAGACAGTCTCCTACGCTGCGAATAACCGTTCAAAGAAGCCTCGAGTGATCGTTTTGCGATTGAAAGGCAAGTCTCTACCAGCGGTTCAGAGAAAGGTTCGGCTACTCGGACGTTTGGTTCCTGGGTGCCGGAAGCAATCGTTTCCGGTGATTCTAGAAGAGGCTACTGATTATATAGCTGCTCTGGAGATGCAGGTCCGTGCACTCGCTCAGTTGCTCTCTGCTTCTGATTCTGGTTCCTCCTCGTCACCGCCGAGCTGA 615 51.38 MASSLILNPVINSDRSRESSRRKKKKRTQPNRDHNQDQSPIKWKSEAQQQLYSSKLVQALRQVRLSHDTSSPNAVPRRGRAVREAADRVLAVSARGKTLWSRAILTNRLKLKFSQRKRQTVSYAANNRSKKPRVIVLRLKGKSLPAVQRKVRLLGRLVPGCRKQSFPVILEEATDYIAALEMQVRALAQLLSASDSGSSSSPPS 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26808642 26809256 - Bma019824.1 Bma04g01120 81489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01120 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 203 IPR044660 GO:0006355
Bma04g01120 204 CDD bHLH_AtIBH1_like 136 187 IPR044549 GO:0006355
Bma04g01120 204 Coils Coil 170 190 - -
Bma04g01120 204 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 203 - -
Bma04g01120 204 MobiDBLite consensus disorder prediction 1 42 - -
Bma04g01120 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 192 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01120 Bma-Chr4:26808642 Bma05g00998 Bma-Chr5:48461233 4.20E-90 dispersed
Bma04g01120 Bma-Chr4:26808642 Bma02g00933 Bma-Chr2:49184765 1.96E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01120 - - csin:114308377 239.58