Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01129 ATGCTCATTCCTCATAACGTGCCTTCTATTGAAGTAGACGCCTCCGACGTTCTGGATGACGGAAATCAAACTCAGGAGAACAGCTTCATATATATACCTCCAAGAGGAAGGACACAACAGTCAGATAAGAAAGTTCAGTGCTATGAGCCTGCAACCATGAAATACTTGGGGTTTCTTCCAGCATTGACTCCAGCTGAGGTCACAAAGAGAGTGGCACTGGCAAGGAGTGCTCAGAAAACATGGGCCAAAAGTAGCTTCAAGCAAAGACGGCAGTTCCTAAGAATACTACTGAAAATATCTTCTCGTGATACCGGGAAGACAATGGTAGATGCTTCATTGGGAGAAATAATGACAACATGTGAGAAGATCACTTGGCTCCTTGCAGAGGGTGAGAAATGGCTAAAGCCTGAATACCGATCTTGCGGAAGATCAATGCTTCACAAGAAAGCCAGAGTGGAGTTTCATCCTCTTGGTGTCATTGGAGCCATTGTCTCGTGGAACTATCCTTTTCATAACATTTTTAATCCAATGCTAGCCGCAGTCTTTTCTGGCAATAGTGTTGTAATTAAGGTCTCAGAACATGCAAGCTGGTCTGGATGTTTTTACTTTCGAATAATCCAAGCTGCACTTGCTGCTGTTGGGGCTCCTGAAAATGTGGTTGATGTGATAACGGGGTTTGCTGAAACGGGAGAGGCATTAGTGTCTTCGGTTGAAAAAATCATATTTGTTGGATCACCTGGTGTGGGTAGGATGATCATGGCAAATGCAGCTGAGACACTCATACCAGTTACACTTGAGTTAGGTGGAAAGGATGCATTTATTGTGTGTGATGACGTGGATTTAGACCATGTTGCACACATTGCTGTCAGAGCTTCCCTTCAATCAAGTGGACAAAATTGTGCTGGAGCTGAGAGATTTTACGTCCACAGGAATATTTATTCTTCATTTGTTAACGAAGTATCCAAAATCGTGAAGTCTGTTGCTGCTGGCCCACCACATTGTGGGAAATATGATATGGGAGCCATCTGCCTGCAAGAGCACTCTGATAAGCTTCAAACCCTAGTAAATGATGCTTTAGAGAAAGGGGCAGAAATTGTTGCCCGTGGAAGTTTTGGACATTTGGCTGAAGATGCTGTTGATCAGTATTTCCCCCCGACTGTGATTGTAAATGTGAACCACAATATGAAACTGATGCAAGAGGAGGCATTTGGACCAATAATGCCAATAATGAAATTCAGCACTGATGAGGAAGCCATTGCGCTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTTTCTGGCAATCAGCATCGTGCAAAGGAGATAGCTTCAAAGATTCATTGTGGAGTTGCTGCAATTAATGATTTTGCATCAACTTATATGTGTCAGTCCTTGCCATTTGGTGGTGTGAAACACAGCGGATTTGGGCGATTTGCAGGAATTGAAGGATTGCGAGCCTGTTGTCTGGTAAAATCAGTTGTTGAGGACAGGTGGTGGCCTTACATCAAAACAAAGATACCTAAGCCTATTCAGTATCCTGTTGCGGAGAACGGTTTCGAGTTTCAGGAGTCACTAGTGGAAGCATTGTATGGCCTCAACATATGGGACCGATTGCGAGCATTGGTGAATGTTTTGAAGATTGTTTCAGATCACAACTCTGGTTCTACTAACAATGCGGCAGGTACAAGCAAGAGGAGCAGCTGA 1710 43.74 MLIPHNVPSIEVDASDVLDDGNQTQENSFIYIPPRGRTQQSDKKVQCYEPATMKYLGFLPALTPAEVTKRVALARSAQKTWAKSSFKQRRQFLRILLKISSRDTGKTMVDASLGEIMTTCEKITWLLAEGEKWLKPEYRSCGRSMLHKKARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSVVIKVSEHASWSGCFYFRIIQAALAAVGAPENVVDVITGFAETGEALVSSVEKIIFVGSPGVGRMIMANAAETLIPVTLELGGKDAFIVCDDVDLDHVAHIAVRASLQSSGQNCAGAERFYVHRNIYSSFVNEVSKIVKSVAAGPPHCGKYDMGAICLQEHSDKLQTLVNDALEKGAEIVARGSFGHLAEDAVDQYFPPTVIVNVNHNMKLMQEEAFGPIMPIMKFSTDEEAIALANDSKYGLGCAVFSGNQHRAKEIASKIHCGVAAINDFASTYMCQSLPFGGVKHSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKIVSDHNSGSTNNAAGTSKRSS 569
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 28035143 28041106 - Bma019840.1 Bma04g01129 81498
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01129 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 493 IPR016162 GO:0016491
Bma04g01129 569 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 15 530 - -
Bma04g01129 569 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Bma04g01129 569 SUPERFAMILY ALDH-like 35 497 IPR016161 GO:0016491
Bma04g01129 569 CDD ALDH_F15-22 48 499 - -
Bma04g01129 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 468 IPR016163 GO:0016620
Bma04g01129 569 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 15 530 - -
Bma04g01129 569 Pfam Aldehyde dehydrogenase family 40 495 IPR015590 GO:0016491
Bma04g01129 569 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01129 Bma-Chr4:28035143 Bma05g00591 Bma-Chr5:35840271 1.43E-62 dispersed
Bma07g00256 Bma-Chr7:3200181 Bma04g01129 Bma-Chr4:28035143 3.87E-44 dispersed
Bma11g00290 Bma-Chr11:2726018 Bma04g01129 Bma-Chr4:28035143 2.02E-45 dispersed
Bma04g01129 Bma-Chr4:28035143 Bma12g01022 Bma-Chr12:42322685 8.51E-60 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01129 - - gra:105796901 999.964