Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01136 ATGGAGGAAGCAAACATGAGATGGTTACGACCAAATGAAATTCATGCTATACTCTGTAATCACAAATACTTCAGCATCAAGGTCAAGCCAGTGCACTTGCCCCCAGGTACAATTTTAAGATTGTTGTTATATTGTTATTCCCTTTATTTATTTTCATTTTCCTCGTTCCCCATTTTATTAACCTTCATTTTATTATTTGATCGCAAGATGCTTAGGAACTTCAGGAAAGATGGTCATAACTGGAAAAAGAAAAAGGATGGGAAGACCATTAAGGAAGCACATGAACACCTGAAGGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGACAGGATACTCCAACCTTCGTCCGCAGGTGTTATTGGCTACTTGATAAGAGTCTGGAACACATAGTTCTTGTTCATTATCGTGAAACTCAAGAGTTGCAGGGTTCTCCAGCAACCCCAGTGAATTCTAATTCTAGTTCTGTCTCTGACCATTCTGCCTCCCGGCGTTTTTCGGAAGAACTAGATTCTGGGACTAACCAAGCTCTATATGTTGGTGAAAATGAACTTCTAGAGTGTAGTAATAAGTTAACTGCGAAGCATTATGAGCAAAGACTTCATGAAATTAACACGCTCGAATGGGATGAGCTTCTTGTAACAGATAATCTTTCCAACACACCTAAAGGAGGAGACAAAGTCTTAGGTTTTCACCAACAGAATCAAGTTGCGGCAAATGATTCCACTGTTGGAGGAGGCGACACGATGTTGGAGGAAATTTCTACATTTGACAATGTCAGTGGATCAATTGGGAGAAATAACGCAAATCATTTTGGTTTGCCAAACAGCTCCTACATATCTACTATGGTTAGTCAATTAAATTCAAATGCGCAGAAAGGAAATACCATTGCAATGGCCTCCAATGTACCCTTAGATATTATGGCGAACGAGGGGTTGCAAAGTCAGGATAGCTTTGGGCGGTGGATAAATGATATTATCTCTGACTCTCCTGGTTCTGTAGATGATCCAGTTTTTGAGTCCTCCATTTTACCTCATTATGATGAATTTACCTCTGCTACGATAAATCATCATCCATCTTCTGTGCCAGAGCAAATGTTTACCATAACTGATATCTCTCCTGGATGGGCTTTTACTGCAGAAAAAACCAAGATTTTAATAACTGGATTTTTTCATGAAGAGTTTGCTCATCTGGCTAAATCCAGTTTGTTGTGTCTCTGTGGCGATGTTTGTATTCCTACAGAAGTCGTTCAACTTGGAGTTTATCGTTTCTTGGTACCTCCACATCCACCTGGATGTGTAAATATCTATCTCAGTTTAGATGGTCATAAACCAATCAGCCAAGTTATGAATTTTGAGTATCGCAACCAATTATTGGATGGTTCAGAAGTTTCTTTAGACGAAAAGGAAAGGTGGGAGGAGTTTGAAGTTCAGATGCGGCTTCTTGGTTTGCTTTTCTCTACATCGAAGAGCCTGAACATTCTGTCTAGTAAAGTATCACAAAATGCCCTAAAGGTAGCGAGAAACTTTGCTCAAAAAACATCTAACATTTCTAATAGTTGGGCTTATTTGCACAAGTCAATTCAAGATAACAAAATTTCGTTTCCTCTGGCAAAAGATGGCCTATTGGAACTTATTTTAAGGAACAGAGTAAGGGAATGGCTGTTAGAAAGGATTATTGAAGGGTCCAAGAAGAGCACTGAATTTGATGCTTACGGTCAAGGAGTAATACACTTGTGTGCCATCCTGGGATATTCATGGGCTGTACAATTATTTGCATGGTCAGGTTTAACATTGGATTTTCGGGACAAATCTGGATGGACAGCTCTTCACTGGGCAGCATATTGTGGAAGGGAGAAAATGGTTGCAGTTCTTCTATATGCCGGAGCAAAGCCAAACTTGGTCACAGACCCAACCTCAGAAAATCCTGGGGGATGCACAGCTGCTGATCTTGCATATGTAAAGGGTCATGATGGCTTGGCTGCCTATCTTTCTGAAAAGGCTTTAGTAGCTCATTTTCAGGAAATGAGTATAGCTGGAAATATAAGGGGTACACTGCAAATCAACACAACTGAGGGGGAGAGTGTAAACCCTGAGAATCTCAGTGAGGAGCAGCTATATATGAAAGATACTTTGGCAGCCTACAGAACAGCTGCCGATGCAGCAGCACGTATAAATGCTGCATTTCGCGAGCATTCTTATAAGCAAAGAACTAAAGAAGTTCAGGTTTCTACTCCAGAGATGGAAGCGCGCAATATTATTGCAGCTATGAAAATTCAGCATGCATTCCGCAATTATGAAATGCGACGAAAAATGGCAGCTGCTGCTCATATACAACATAGATTCCGTACTTGGAAAATGCGTAAAGATTTCCTTAACATGCGACGTCAAGCTATAAGAATTCAAGCTGCATTTCGAGGCTTCCAAGTACGGAGGCATTACCGTAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGCTATACTACGGTGGCGCTTAAAGAGAAAAGGCTTTCGTGGGCTTCAGATTGAACCTGTGGATCCAATTGTAGAGGAAAGACAGGAAAGTGATACCGAGGAAGACTTTTACCGTACAAGCCAGAAACAAGCAAGTGAGCGTGTTGAGAGATCTGTTGTACGAGTTCAGGCCTTGTTTCGTTCAAGGAAAGCACAAGAAGACTATCAGAAAATGAAGATGGCCCATCTGGAAGCAATGGTAAGTAACACACCCTGA 2739 40.85 MEEANMRWLRPNEIHAILCNHKYFSIKVKPVHLPPGTILRLLLYCYSLYLFSFSSFPILLTFILLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGQDTPTFVRRCYWLLDKSLEHIVLVHYRETQELQGSPATPVNSNSSSVSDHSASRRFSEELDSGTNQALYVGENELLECSNKLTAKHYEQRLHEINTLEWDELLVTDNLSNTPKGGDKVLGFHQQNQVAANDSTVGGGDTMLEEISTFDNVSGSIGRNNANHFGLPNSSYISTMVSQLNSNAQKGNTIAMASNVPLDIMANEGLQSQDSFGRWINDIISDSPGSVDDPVFESSILPHYDEFTSATINHHPSSVPEQMFTITDISPGWAFTAEKTKILITGFFHEEFAHLAKSSLLCLCGDVCIPTEVVQLGVYRFLVPPHPPGCVNIYLSLDGHKPISQVMNFEYRNQLLDGSEVSLDEKERWEEFEVQMRLLGLLFSTSKSLNILSSKVSQNALKVARNFAQKTSNISNSWAYLHKSIQDNKISFPLAKDGLLELILRNRVREWLLERIIEGSKKSTEFDAYGQGVIHLCAILGYSWAVQLFAWSGLTLDFRDKSGWTALHWAAYCGREKMVAVLLYAGAKPNLVTDPTSENPGGCTAADLAYVKGHDGLAAYLSEKALVAHFQEMSIAGNIRGTLQINTTEGESVNPENLSEEQLYMKDTLAAYRTAADAAARINAAFREHSYKQRTKEVQVSTPEMEARNIIAAMKIQHAFRNYEMRRKMAAAAHIQHRFRTWKMRKDFLNMRRQAIRIQAAFRGFQVRRHYRKIIWSVGVLEKAILRWRLKRKGFRGLQIEPVDPIVEERQESDTEEDFYRTSQKQASERVERSVVRVQALFRSRKAQEDYQKMKMAHLEAMVSNTP 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28303415 28320514 - Bma019851.1 Bma04g01136 81505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01136 912 ProSiteProfiles IQ motif profile. 773 799 IPR000048 GO:0005515
Bma04g01136 912 SUPERFAMILY Ankyrin repeat 566 669 IPR036770 -
Bma04g01136 912 SMART iq_5 772 794 IPR000048 GO:0005515
Bma04g01136 912 SMART iq_5 795 817 IPR000048 GO:0005515
Bma04g01136 912 SMART iq_5 875 897 IPR000048 GO:0005515
Bma04g01136 912 ProSiteProfiles IQ motif profile. 796 820 IPR000048 GO:0005515
Bma04g01136 912 ProSiteProfiles IQ motif profile. 757 783 IPR000048 GO:0005515
Bma04g01136 912 SUPERFAMILY E set domains 370 457 IPR014756 -
Bma04g01136 912 Pfam IQ calmodulin-binding motif 798 817 IPR000048 GO:0005515
Bma04g01136 912 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Bma04g01136 912 ProSiteProfiles IQ motif profile. 877 905 IPR000048 GO:0005515
Bma04g01136 912 SMART ANK_2a 646 675 IPR002110 GO:0005515
Bma04g01136 912 SMART ANK_2a 607 636 IPR002110 GO:0005515
Bma04g01136 912 Pfam CG-1 domain 63 140 IPR005559 GO:0003677
Bma04g01136 912 ProSiteProfiles CG-1 DNA-binding domain profile. 1 147 IPR005559 GO:0003677
Bma04g01136 912 Gene3D - 487 672 IPR036770 -
Bma04g01136 912 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 908 - -
Bma04g01136 912 Pfam Ankyrin repeats (3 copies) 556 636 IPR002110 GO:0005515
Bma04g01136 912 MobiDBLite consensus disorder prediction 145 163 - -
Bma04g01136 912 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 1 908 - -
Bma04g01136 912 Gene3D - 774 820 - -
Bma04g01136 912 SMART CG_1_2 1 142 IPR005559 GO:0003677
Bma04g01136 912 Gene3D Immunoglobulins 364 460 IPR013783 -
Bma04g01136 912 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Bma04g01136 912 MobiDBLite consensus disorder prediction 145 171 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01136 Bma05g01017 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00850 Bma-Chr4:10747548 Bma04g01136 Bma-Chr4:28303415 3.71E-25 dispersed
Bma04g01136 Bma-Chr4:28303415 Bma08g00419 Bma-Chr8:13769590 6.06E-30 dispersed
Bma04g01136 Bma-Chr4:28303415 Bma05g01017 Bma-Chr5:48659681 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57227 PF12796 Ank_2 6.20E-08 CL0465 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01136 K21596 - zju:107433255 1160.21