Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01143 CACAACGGGCTGGAAGAGCTCAAATCGTGGCGGGTTTTCGTAGGGTTTCACAATGATGAGTTATTGGTCTCTGCGTCGAATGCCGTGCTTGCAGATGGGAGTAAACTCCCAGCTCTTGTCGGAAACGGCACCATTTTCGCTGGGTTTCCGTCGACGGACCTGAAGACAGCGGTGGAGACCGCTGGAGACATGACTCAGATGCAGGTTAAGGTCGATTTGATCGGAACACAGTTCGGTGTCGCCTCGCCAGAGATTCCGATGCCGCTGAATATATCTCTGGTCAATGATGGTTATGCTTGCGGGGAATCCACAATGCAAGTAGGGACAAGAGAAATGCAAGTTTGTTGCATTCCTGATTCGAAGATCAAAACAAACACAAGTATTAGTGACGAGTTCTTGCCTCGCCAAGATGGTGATCTCGTAATCATGTATGATGTTACCAAAACGTACGACTCGAGTTATTGGGCGCAGGTTACAATCTCTAATCATAACCCTCTTGGTCGTTTGGATAATTGGAAGCTAAGCTGGGATTGGATGATGGGTGAATTTATATACTCCATGAGAGGAGCATATCCTTATGTTGTCGATTCTTCGGAGTGTATATTTGGCTCTCAAGGGAACCATTATCAGGGCATGGAATTTTCTGAGGTGTTGAACTGCGAAAGACGGCCAACTATTGTTGATTTGCCGCTCACTAAAGCTAACGACACAAACCTAGGAATGGTACCTTATTGTTGCCGAAATGGAACAATCCTACCTCCGCACATGGATCCAAGCAAATCAATATCTTCATTTCAAATGCAAGTTTTCAAAATGCCCCCGGAGCTAAACCGTTCTCAGCTCACACCTCCACAAAACTGGAAAATTAATGGTAGCCTCAATCCTAGTTACCAATGCAGCCCTCCAATAAGAGTGAGTCCCAGCCAATTCCCTAGTTCAACTGGGTTACCTTCTCAAACCACAGCAGTGGCTAGTTGGCAAATTGTTTGCAATATTAGTCGGCCTAAATCATCCAGTCCTAAATGCTGTGTCTCATTTTCTGCATACTACAACGAGTCAGTGATCCCTTGTCGAACTTGTTCATGCGGATGTCCGCGCAACACGAGCCGTAGTTGTAGCTCAACTTCATCTGCTATGCTTCTTCCGCCTGAGGCCCTTCTTGTTCCCTTTGATAGTAGAACAGAGAGAGCATTATCTTGGGCTGCACTGAAACACTCTCCGGTCCCAAATCCAACCCCTTGTGGCGATAATTGTGGAGTGAGTATAAACTGGCATGTATACGCTGATTATTCGACTGGATGGAGTGCGAGAATCACCCTTTTCAATTGGGATGATTTCGACTTTGCCGATTGGTTCGTTGCAGTGGAGATGAACAGAACAGCCCCAGGATTTCAAGCAATGTACTCCTTTAATGGAACTACTTTAGAACTACACGGTGCTAATAACACCATTTTTATGCAGGGTCTTCCTGGATTAAACTACTTAGTTAGGGAGAAAGATGGAGATGACCCGGAGAAAGATCCGAGATTGCCCGGAAAACAGCAGTCGGTTATTTCATTTACAAAGAAAAACATTCAAGGAATCAAGGTTCATGCTGGAGATGGGTTTCCTTCAAAAGTGTTCTTCAACGGAGAGGAGTGTTTGATTCCTCAATTACTTCCAAGTGCAGCTAGTTTCAAGGTTCCAGCCTCATTTTTTTCCCTCGTGCTTTCAATTCTTATGATCATTTTTGTTCATTAA 1740 44.94 HNGLEELKSWRVFVGFHNDELLVSASNAVLADGSKLPALVGNGTIFAGFPSTDLKTAVETAGDMTQMQVKVDLIGTQFGVASPEIPMPLNISLVNDGYACGESTMQVGTREMQVCCIPDSKIKTNTSISDEFLPRQDGDLVIMYDVTKTYDSSYWAQVTISNHNPLGRLDNWKLSWDWMMGEFIYSMRGAYPYVVDSSECIFGSQGNHYQGMEFSEVLNCERRPTIVDLPLTKANDTNLGMVPYCCRNGTILPPHMDPSKSISSFQMQVFKMPPELNRSQLTPPQNWKINGSLNPSYQCSPPIRVSPSQFPSSTGLPSQTTAVASWQIVCNISRPKSSSPKCCVSFSAYYNESVIPCRTCSCGCPRNTSRSCSSTSSAMLLPPEALLVPFDSRTERALSWAALKHSPVPNPTPCGDNCGVSINWHVYADYSTGWSARITLFNWDDFDFADWFVAVEMNRTAPGFQAMYSFNGTTLELHGANNTIFMQGLPGLNYLVREKDGDDPEKDPRLPGKQQSVISFTKKNIQGIKVHAGDGFPSKVFFNGEECLIPQLLPSAASFKVPASFFSLVLSILMIIFVH 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28850026 28852015 + Bma019869.1 Bma04g01143 81512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01143 579 PANTHER COBRA-LIKE PROTEIN 7 2 575 - -
Bma04g01143 579 PANTHER COBRA-LIKE PROTEIN 7 2 575 - -
Bma04g01143 579 Pfam COBRA-like protein 154 333 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01143 Bma05g01021 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01143 Bma-Chr4:28850026 Bma13g01035 Bma-Chr13:42938329 0 dispersed
Bma14g01053 Bma-Chr14:12650933 Bma04g01143 Bma-Chr4:28850026 4.83E-16 dispersed
Bma04g01143 Bma-Chr4:28850026 Bma05g01021 Bma-Chr5:48729417 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01143 - - csv:101209258 892.493