Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01236 ATGATTTCTGTTGCGTCCTCCATTGAAGCACAGCAGCCGGAGATTTCTCTGACGGCGGTTAAACCACCGTCACCTAACATTCTTAGAAAGGTGGATTCCGAAACTACCGTCATCTTCAAATCGAAATTGCCGGATATTCCCATCCCCAACCACCTCCCTCTTCCCAACTACTGCTTCGAGCGCCTCTCCGAGTTCTCCGAACGGCCATGTCTGATAGTCGGATCCACCGGAAAAACCTACACTTTCGTTGAAACCCACCTCATTTCCAAAAGAGTTGGAGCCGGATTGACCCGTCTCGGAATTAAAAAGAACGACGTCATAATGATTCTCCTCCAAAATTCCGCTGAATTCATTTTCACTTTCATCGGCGCGGCCATGATCGGCGCCGTCACCACCACGGCCAACCCGTTCTACACGGGCGCAGAAGTTTTCAAGCAAATAAAATCCTCTGGAGCAAAACTGATCGTAACGCAGGCACAATACGTTGAAAAACTCCGAGAGCCAACGGAAAACGACCCCAAACTCGGCGAGGATTTCACAGTAATCACCATTGACAACCCGCCGGAGAAATGCCTACACTTCTCAGCAATTTTGGAGGCTAACGAGGCCGGTCTTCCAGCCACTTCCATCGACGCAAACGACCCAGTGGCGCTGCCGTTTTCCTCCGGCACCACCGGGCTACCGAAGGGAGTAATTCTCACCCACAAAAGCTTAATAACAAGCGTCGCTCAGCAAGTAGACGGAGAGAATCCAAATCTCTATCTAACTCCAGACGACGTCGTTTTATGCGTCCTCCCACTATTTCACATATACTCTCTCAATAGCGTCCTCTTATGCTCCTTGAGAGCAGGAGCAGCCGGTTTTGCTCATGCAAAAGTTTGA 882 50.0 MISVASSIEAQQPEISLTAVKPPSPNILRKVDSETTVIFKSKLPDIPIPNHLPLPNYCFERLSEFSERPCLIVGSTGKTYTFVETHLISKRVGAGLTRLGIKKNDVIMILLQNSAEFIFTFIGAAMIGAVTTTANPFYTGAEVFKQIKSSGAKLIVTQAQYVEKLREPTENDPKLGEDFTVITIDNPPEKCLHFSAILEANEAGLPATSIDANDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTPDDVVLCVLPLFHIYSLNSVLLCSLRAGAAGFAHAKV 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36305446 36306327 + Bma020015.1 Bma04g01236 81605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01236 293 Gene3D - 29 292 IPR042099 -
Bma04g01236 293 PANTHER 4-COUMARATE--COA LIGASE 3 36 286 - -
Bma04g01236 293 SUPERFAMILY Acetyl-CoA synthetase-like 44 286 - -
Bma04g01236 293 Pfam AMP-binding enzyme 61 286 IPR000873 -
Bma04g01236 293 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Bma04g01236 293 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01236 Bma-Chr4:36305446 Bma11g00683 Bma-Chr11:15241638 2.65E-98 dispersed
Bma04g01236 Bma-Chr4:36305446 Bma07g01477 Bma-Chr7:50405268 1.16E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01236 K01904 - jre:108988342 415.616