Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01304 | ATGCTTCAAATTCGGCTTAGTAGGATTCCTGCTGCAGATGGTGGGAGTGGGGTCAAGACTTTACCTGCTGACTCTGTTACAGTTGCATGCCCTGACCACCTTGTCCTAGCTGATCTGCCTGTGGCAAAGGCCATTGGTTCAGCAACAGCTGCCTCTCTTGTCAAGTCTGTTGGTCGCCGGTCACGCCGTCAACTTGGCGAACGCGTCCATTTTTGTGTTCGATGTGATTACCCTATTGCTATCTATGGCCGCCTGAGCCCTTGTGAGCATGCCTTCTGTCTGGATTGTGCGAGGAGTGTTTCAATTTGTTATCTTTGTGATGAACGTATTCAGAAGATCCAAACAGTTAAAATGATGGAGGGCATCTTCATTTGTGCAGCACCTCATTGTCTCAAGTCCTTTATGAAGAGGACTGAATTTGAATTCCATATTCATGAGAATCATGCTGACCTACTTCAGCCAAATCCTGAGAAAGATGATGGAAATGAATCTGAGGCTCAGAGTAACAAACAATCTACAGCTTCTGATTCAACTGTCCGAGGTCCACTAAGGCAAGCATTTTCTCCAGGCTCCAATACCCAGCATCTAGATCGGGAAGACAAAGCTCAGCGGCAACAATCTAGAGACCAATCTTGGTCAGCTACACTTTCAAAACAGCCTACAAGTTTTGGCCAATCCCAACATAACCTATCAGACTCTCTACCGGATGACAGCCAACCACAAGCCCTTGACAGGCTCGATAGTCAAAACCGTTTCCTCCAACAAAACTTTGAAACCCAAGGTGCTCCATATCAGGAAACTGGTCTGTTACCGGATAAGCAACTTGGAATTCTATCTGAGCTGCCATTTTCTGAATATCCACCCATGCATACTATTCAGCCCCCAAGCTTTGTGGTACCGATGACCTCAAACTTAATGTTGACTCCCCCTCTACCATTTGGTTATCCTCCTTTTCCAACGGAGGGATCTCAACAGTTTTACAGTGCGCCTTATGAAGTGGCCAGGCAAGATTCAGCTGCACCTCAAGTAGGACCAGAGCAGGGGTCGTTGTTGGGTTTCCCGCCATCAGTAGGTACAAATTTTTCGGGAAGTTATCAGCAGCCGTGGAATGCTGTGAAAGTCATTCCTTTTGAACCTTCTGCGGGGGCTCAAGGAATTTCAGATGTTTTGGATGATTCTCAAGTGAAAGGTGGATTCTATCAGGCTGAATATGGTCGCCATCCAGGAAGTTTGCCATTGAATGCTTCCATTCCACCTTTGGCTAGTAAGGGGCTTGAACCAGTGCAGAGTGGCAGCGCGTTGGATCTCAGGGATGGGAAGGGTATATTGGCACCACAGCCAATGCCATTTTCCGCTCGGCCACACCCACCGCAACCTCAGTCCTCACAACACATGCGGGGTAAGTTTTATATGGGCGAAATGGGTCATGACGGACAGGTTTCGGATGGCAGCATGAGAACAATGATAATTTTGGTGGTGGTTTGGACTAAAGATATCAAAGGGTTATTTTCTCCTCATTTGATCCTACATCCTATCAATATCTAA | 1545 | 46.86 | MLQIRLSRIPAADGGSGVKTLPADSVTVACPDHLVLADLPVAKAIGSATAASLVKSVGRRSRRQLGERVHFCVRCDYPIAIYGRLSPCEHAFCLDCARSVSICYLCDERIQKIQTVKMMEGIFICAAPHCLKSFMKRTEFEFHIHENHADLLQPNPEKDDGNESEAQSNKQSTASDSTVRGPLRQAFSPGSNTQHLDREDKAQRQQSRDQSWSATLSKQPTSFGQSQHNLSDSLPDDSQPQALDRLDSQNRFLQQNFETQGAPYQETGLLPDKQLGILSELPFSEYPPMHTIQPPSFVVPMTSNLMLTPPLPFGYPPFPTEGSQQFYSAPYEVARQDSAAPQVGPEQGSLLGFPPSVGTNFSGSYQQPWNAVKVIPFEPSAGAQGISDVLDDSQVKGGFYQAEYGRHPGSLPLNASIPPLASKGLEPVQSGSALDLRDGKGILAPQPMPFSARPHPPQPQSSQHMRGKFYMGEMGHDGQVSDGSMRTMIILVVVWTKDIKGLFSPHLILHPINI | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 43466900 | 43469517 | + | Bma020118.1 | Bma04g01304 | 81673 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01304 | 514 | MobiDBLite | consensus disorder prediction | 150 | 242 | - | - | |
Bma04g01304 | 514 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 125 | 148 | IPR013087 | - | |
Bma04g01304 | 514 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED | 1 | 464 | IPR040383 | GO:0016567|GO:0061630 | |
Bma04g01304 | 514 | MobiDBLite | consensus disorder prediction | 166 | 193 | - | - | |
Bma04g01304 | 514 | ProSitePatterns | Zinc finger RING-type signature. | 88 | 97 | IPR017907 | - | |
Bma04g01304 | 514 | MobiDBLite | consensus disorder prediction | 150 | 165 | - | - | |
Bma04g01304 | 514 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HAKAI | 1 | 464 | - | - | |
Bma04g01304 | 514 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 123 | IPR013083 | - | |
Bma04g01304 | 514 | MobiDBLite | consensus disorder prediction | 207 | 242 | - | - | |
Bma04g01304 | 514 | CDD | RING-HC_HAKAI_like | 70 | 106 | IPR040380 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01304 | K15685 | - | qsu:112018474 | 616.305 |