Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01334 ATGGATATGGAGGTTGACGATTCTTCGACAGACAAAGCTAAAGGCGAAGAAGACCGTGGAAAGCTTACGATGGTGCTATTAGTAGGTGCCCCAGGAAGCGGCAAATCCACCTTCTGCGAAAACCTCGTATCCTCTTCTACCTCCTATTGGGTTCGAATCTGCCAGGATACTATTGCAAATGGTAAATCTGGAACTAGAGCTCAGTGTCTAGAGAGTGCAGCCAGTGCGTTAAAAGATGGTAAAAATGTACTAATAGACAGATGCAATATGGAAAAAGAACAACGGGCAGATTTCGTTAAGCTTGGTAGTTCCCAAGTGGATGTTCATGCTGTCGTCCTGGATCTTCCTGCACAACTTTGCATTTCTCGATCTGTTAAGCGAACTGGTCATGAAGGAAACCTACAAGGTGGCAAAGCTGCTGCAGTAGTAAATAAAATGCTGCAGAAGAAAGAATTGCCTAAACTCAGTGAAGGGTTTACTCGTATCACTTTCTGTCAGAATGAGAGTGATGTTCAATCCACACTCAATACATATAGTTCACTCGGTCCTTTGAATACCCTTCCGCATGGATATTTTGGCCAAAAAAATCCAAGTGCAAAAGTGCAACTTGGCATAATGAAGTTCCTCAAGAAAGCTGATGATCATACTCCTACAAGATACGAAGCACCAAACATTCAGAATTCATCTCCTCAAGCTACAGAAATTAAGAGTACCTGCAGTGAAATTATATCTTCAGTGTCTTCTCACTCCAATAAAGAGTTAAAGGAAGGAGAGGATCCTAAGGTTGAGTCTGTCAAAGGCGAGAGATTTTCAAATAATGCTCAAACTCTTGCATTTCCATCAATTTCAACGGCAGATTTCCAATTCAGTCTTGAAAAGGCATCTGAGATTATTGTCGAGACAGTTGAAGAATTTATGGACAAGCTTGGGAATTCCAGGCTTGTTTTAGTAGACTTGAGCCATAGATCAAAGATTTTGTCTTTGGTTAAGGCGAAAGCTGATCAGAGAAACATTGACTCAAGTAAGTTTTCAACATTTGTGGGAGATATAACTCAACTTTATTCAAAAGGTGGCTTGCGCTGCAATGTCATTGCTAATGCTGCAAACTGGAGGCTAAAACCGGGAGGTGGAGGCGTAAATGCTGCCATTTTCAAAGCTGCTGGTACAGCACTGGAAGTGGCAACCAAAGAGCAGGCAAAGTCTCTTCAACCTGGTAATGCAGTTGTAGTTCCTCTACCTTCAGCTTCTCCATTGTTCAAAGAGGAAGGCGTGACTCATGTCATACATGTTCTTGGACCAAATATGAATTCTCAAAGGTCGAACTGCCTCAATAATGATTATAACAAAGGTTCTGAACTTCTACGGGCGGCCTATACTTCTTTATTTGAAGGCTTTCTCTCTTTAAACCAATCCAAATTTAGCTAA 1425 41.47 MDMEVDDSSTDKAKGEEDRGKLTMVLLVGAPGSGKSTFCENLVSSSTSYWVRICQDTIANGKSGTRAQCLESAASALKDGKNVLIDRCNMEKEQRADFVKLGSSQVDVHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAVVNKMLQKKELPKLSEGFTRITFCQNESDVQSTLNTYSSLGPLNTLPHGYFGQKNPSAKVQLGIMKFLKKADDHTPTRYEAPNIQNSSPQATEIKSTCSEIISSVSSHSNKELKEGEDPKVESVKGERFSNNAQTLAFPSISTADFQFSLEKASEIIVETVEEFMDKLGNSRLVLVDLSHRSKILSLVKAKADQRNIDSSKFSTFVGDITQLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFKAAGTALEVATKEQAKSLQPGNAVVVPLPSASPLFKEEGVTHVIHVLGPNMNSQRSNCLNNDYNKGSELLRAAYTSLFEGFLSLNQSKFS 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45644626 45646771 - Bma020172.1 Bma04g01334 81703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01334 474 SUPERFAMILY Macro domain-like 271 314 IPR043472 -
Bma04g01334 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 165 IPR027417 -
Bma04g01334 474 MobiDBLite consensus disorder prediction 251 266 - -
Bma04g01334 474 Pfam AAA domain 24 132 - -
Bma04g01334 474 Gene3D Leucine Aminopeptidase, subunit E, domain 1 215 321 IPR043472 -
Bma04g01334 474 Gene3D - 2 180 IPR027417 -
Bma04g01334 474 Gene3D Leucine Aminopeptidase, subunit E, domain 1 322 469 IPR043472 -
Bma04g01334 474 PANTHER APRATAXIN-RELATED 23 425 - -
Bma04g01334 474 PANTHER APRATAXIN 23 425 IPR026963 GO:0003677|GO:0006281|GO:0033699
Bma04g01334 474 Pfam Macro domain 365 461 IPR002589 -
Bma04g01334 474 SMART YBR022w_8 342 466 IPR002589 -
Bma04g01334 474 SUPERFAMILY Macro domain-like 325 463 IPR043472 -
Bma04g01334 474 MobiDBLite consensus disorder prediction 247 267 - -
Bma04g01334 474 ProSiteProfiles Macro domain profile. 330 474 IPR002589 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01334 K10863 - qsu:112040136 657.136