Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01375 ATGGAGATCCCTTTTAAGTTTCATCCCGTGTCAGTTCCGATTTTCCTTTACTTCCTCTGCACCATTCATGCGATTTTGGCTGCTGATTATGTGCCTTCTGATAAGATCTTGATAAACTGTGGGGGGCCTCCCCAGGCTAACGATCCTTACGGCCGGGCATGGGTCACCGATATTGGGTCGGAATTTGCCTCGCCGGTCGGAAACTCCGTAGCATCTAAAGCTACCATCCAAGACCCTTCAGTTTCCGAAGTTCCATTCATGACTGCTCGTGTTTTCCGCTCTAACTTTACCTATAGTTTTCCCGTCGGAGTCGGTCGGCTGTTTGTCCGCCTCTACTTTTACCCTACTTCTTACGAAGGGCTCAACGCATCTGACGCTCTTTTCACCGTCACGGCCAACTCCTATACTCTTCTCAAGAATTTCAGTGCTCTTCAGACGGCACGGGCGTTGAATTTTGCATATATTATGAAAGAATACTCCATTAATGTTCAAGATAAGACTTTGAACATTACCTTCACTCCATCTTCCACTGGTTCCAATGTGTATGCTTTCATTAACGGGATTGAGATCGTGTCTATGCCGGATATTTACAGTGCTACAGATGGAACAACCATGATTGTGGGTCAAAATTCTCCATTTGATATTGATAACACAACAGCCCTGGAGAATGTTTATCGGTTGAACGTGGGAGGGAGCAATATCTTGCCTCCAGCAGATACTGGTCTTTTCAGGATTTGGGTTGATGATACAGCTTACATCTTCTCTGCAGCTCTTGGGGTAACCTTGGCAGCTGAATCAAACTTCACCATTAAATACCCATCAAACATGCCTACTTACACAGCACCTCTCGATGTTTATGCCACTGCAAGATCAATGGGTCCGACCACTGCTGTCAACACGAACTTCAATATGACTTGGGTTTTTGCGATTGATTCCGGATTTTCTTATCTTGTTAGGCTTCATTTCTGTGAGATTACAGACATTATAAATAAGATTAATCAAAGAGTGTTTCAGATCTTTCTTAACAATCAGACTGCTACTTCTGAGGCAGATGTAATTGCCTGGGCTGGAGGAAATGGGGTTCCTGTGTATAAGGATTATGTTGTGCTTGTTCCAACTGGGAGTCCAAGGCAGGATCTGTGGCTTGATCTCCATCCAAACACAGGTACTTCCTCCCAATATTACGACACCATCTTGAATGGTGTGGAGATATTCAAAATTAACAATACAAATGGCAATCTAGGAGGTACAAATCCCATACCAGAGGTACAAGACATAATCGAACCGCCAACAGACGTATCATCGTCCAATCACGGGAAATTGGGGAATCGTACGGCTATCATTGCCGGGAGCGTTAGTGGTGGAGTTGTTTTAGCACTTATCGTTGGTTTTTTTGTCGTTAGTGCTTCCCGTCGACGGAAGCTTGCGAAGGAATCAAGTGCAAGTGAAGGGCCATCTGGGTGGCTTCCTCTTTCGCTCTACGGGAATTCACACTCTGCAGGCTCTGCAAAGACAAACACTACCAGAAGTTATGCATCGTCCCTCCCGTCAAACCTTTGTCGGCACTTCTCATTCACCGAAATCAAGGCTGCCACCAAGAACTTCGACGAATCCTTACTTCTCGGAGTGGGAGGATTTGGTAAGGTTTACAAGGGAGAAATCGATGGAGGTACAACTAAAGTTGCCATTAAGCGGGGAAATCCACTCTCCGAGCAAGGTGTTCATGAGTTCCAAACTGAAATCGAAATGCTTTCGAAGCTTCGCCATCGCCACCTTGTTTCGCTGATTGGCTATTGTGAGGAAAACTGTGAGATGATCCTTGTCTATGATTACATGGCCCACGGAACTCTTCGTGAGCATCTGTACAAGACCCAAAAGCCGCCACTGCCGTGGAAGCAGAGGCTTGAGATATGTATTGGAGCTGCTCGAGGTTTGCATTATCTCCACACTGGCGCTAAGCATACGATTATTCATCGAGATGTAAAAACAACCAACATTCTGTTGGACGAGAAGTGGGTGGCCAAGGTTTCAGATTTTGGATTGTCAAAAACGGGTCCCACATTGGACAACACACATGTCAGCACTGTCGTAAAGGGTAGTTTCGGGTACTTGGATCCAGAATACTTCAGGCGACAACAGCTCACGGACAAATCCGATGTTTACTCATTCGGAGTTGTTCTTTTCGAGATTTTGTGTGCTCGTCCGGCACTAAATCCGAGTCTTCCAAAGGAGCAAGTCAGTTTGGCTGAGTGGGCTGCACACTGCCACAACAAAGGTATTCTCGAGCAGATGATTGACCCTCTCCTGAAAGGGAAGATTGCGCAAGAATGTTTCAAGAAAGTCGCAGAGACTGCAATGAAATGCGTGGCTGACCAAGGCATCGACAGGCCGTCGATGGGCGATGTGTTATGGAACCTAGAGTTTGCCTTGCAGTTGCAGGAGAGTGCGGAAGAGAGTGGCAAGGTTCTCAGCGGGGTGGCAGCAGAGGAGGATCAGTCGTTCGACGTAGAAACTAAAGGGAAGAAGGATCCAAATATTTTTCCTGAGTTCGAAGGCAATGTAATGGACTCCAGCAGTGGCATAAGCATGAGCATAGGCGGCCGTAGCCTGGCCAGCGAAGATTCCGACGGGTTGACCCCAAGCGCGGTTTTCTCACAGATAATGAACCCGAAAGGGCGCTGA 2682 46.76 MEIPFKFHPVSVPIFLYFLCTIHAILAADYVPSDKILINCGGPPQANDPYGRAWVTDIGSEFASPVGNSVASKATIQDPSVSEVPFMTARVFRSNFTYSFPVGVGRLFVRLYFYPTSYEGLNASDALFTVTANSYTLLKNFSALQTARALNFAYIMKEYSINVQDKTLNITFTPSSTGSNVYAFINGIEIVSMPDIYSATDGTTMIVGQNSPFDIDNTTALENVYRLNVGGSNILPPADTGLFRIWVDDTAYIFSAALGVTLAAESNFTIKYPSNMPTYTAPLDVYATARSMGPTTAVNTNFNMTWVFAIDSGFSYLVRLHFCEITDIINKINQRVFQIFLNNQTATSEADVIAWAGGNGVPVYKDYVVLVPTGSPRQDLWLDLHPNTGTSSQYYDTILNGVEIFKINNTNGNLGGTNPIPEVQDIIEPPTDVSSSNHGKLGNRTAIIAGSVSGGVVLALIVGFFVVSASRRRKLAKESSASEGPSGWLPLSLYGNSHSAGSAKTNTTRSYASSLPSNLCRHFSFTEIKAATKNFDESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPSLPKEQVSLAEWAAHCHNKGILEQMIDPLLKGKIAQECFKKVAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGKVLSGVAAEEDQSFDVETKGKKDPNIFPEFEGNVMDSSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 47356247 47358928 + Bma020235.1 Bma04g01375 81744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01375 893 PANTHER - 21 845 - -
Bma04g01375 893 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524
Bma04g01375 893 MobiDBLite consensus disorder prediction 855 886 - -
Bma04g01375 893 CDD STKc_IRAK 541 807 - -
Bma04g01375 893 Pfam Protein tyrosine and serine/threonine kinase 541 803 IPR001245 GO:0004672|GO:0006468
Bma04g01375 893 SMART serkin_6 535 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01375 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Bma04g01375 893 PANTHER OS07G0166700 PROTEIN 21 845 IPR045272 GO:0004714|GO:0006468
Bma04g01375 893 Pfam Malectin-like domain 38 407 IPR024788 -
Bma04g01375 893 Gene3D Phosphorylase Kinase; domain 1 496 611 - -
Bma04g01375 893 Gene3D Transferase(Phosphotransferase) domain 1 612 829 - -
Bma04g01375 893 Gene3D - 35 194 - -
Bma04g01375 893 Gene3D - 220 409 - -
Bma04g01375 893 MobiDBLite consensus disorder prediction 833 893 - -
Bma04g01375 893 SUPERFAMILY Protein kinase-like (PK-like) 507 808 IPR011009 -
Bma04g01375 893 ProSiteProfiles Protein kinase domain profile. 535 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01375 Bma-Chr4:47356247 Bma13g00443 Bma-Chr13:8238040 0 dispersed
Bma11g00847 Bma-Chr11:28357623 Bma04g01375 Bma-Chr4:47356247 5.04E-70 dispersed
Bma04g01375 Bma-Chr4:47356247 Bma02g00448 Bma-Chr2:6850841 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66478 PF12819 Malectin_like 1.30E-43 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01375 - - pxb:103930225 1365.9