Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01386 ATGGATCCGCGTTGTAAGGGGTATTCCTATTCCATAAAAGACATTCAATTGAGCAACCAATCTTTATTAGTTCACCCCAATCCGAATGCTGTAGTCGGGCCCAGATTTGAAAACGCCATTTTAGATCAAAGATTTGATGAACTTCATTATCTTCCACTTGATCCCCCACCTAGCAATGTGGTATCTAGTTCGAGTAATATCACTTCGTCTTCGAGTGCGAGCCACGAAAATTCGCCCGAAGATTGTGATTTTTCTGATGCTGTTTTGGGGTACATCAGCCAGATTCTCATGGAAGAAGATATGGAGGAGAAAACTTGTATGCTTCAAGACTCTTTGGATCTTCAAGCCGCTGAGAAATCATTTTATGATGTTCTTGGCGAAAAGTATCCTCATGATCAGAACAGGTGTTATAGTAGTCAATACAATGAAAGTTTAGATGATAATTCATTTGGAAATTATTATAACTATCTCACTAATATTTATGGAGAAAGTGCCTATTTTGGGAATGATACTCATAATAAACTCCTTGTTGAAGATTTCTCACAGATAGATAGCCTACCTTCTTGTTTTATAGATCAGTCAGTATATAGCTCTTCAAATAGCGTTATAAGCAGCTTCGACAACGGGCTTGTGGACTCTTCGAACAGTTCATTTTCAGTTCCTGAATCTAGTAATGGAAGCCAATCAATATGGCAGTTCAGGAAAGGGGTTGAAGAGGCGAATAAATTTCTACCAAAAGAAAATGGTTTATTTCTTAATCAAGGGGCGGAGGCCGGTGAGGTCGTCGTCAAGGTGGAGACTAGGGAAGGCAATGAGTTGTTGCCGCTTGAATCGAGGGGAAGAAAGAATCCTCTCAGGGAAGATGGAGATTTGGAAGAAAAGAGAAGTAATAAGCTAGCGGCTATTTTCACCGACTCGACTTTACGATCTGAGATGTTTGACAATGTCTTACTTTGTAGTGCAGGCGAAGGGATGCGAAAATTGGCAGCCCTTCGCGATTATCTACAGATGGCGAAACGGAAAACTTTGGAGCAGAACGGACAATCGAAGGGATATAACGGAGGGAGGGGCCGAGGGAAGAAACAGAACAGGAAGAAGGAGGTGGTGGATTTGAGAACTTTGTTAATTCACTGTGCACAGGCTGTTGCTGCTGATGATCATAGGAATGCAAATGAATTGCTTAGGCAAATTAGGCAGCATTCGTCTCCTTTTGGAGACGGAAACCAAAGGTTAGCTCACTGCTTTGCGGAAGGGCTCGAGGCTCGGTTGGCTGGCATAGGAAGCCAGATATATAAAGGTCTTGTCAGTAGGAGAAGATGTGCTGCAGATCTGTTGAAAGCTTACCATTTATACCTAGCAGCCTGTCCTTTTCGGAAAATGTCGAATTTTACGTCCAATAAGACAATAATGAGTATTGCAGCAAATTCAAGTAGACTACATGTCATAGACTTTGGCATTCTTTATGGATTTCAATGGCCAACCCTTATTCAGAGACTCTCATGGAGAAAAGGCGGTCCTCCGAAGCTTCGAATCACCGGAATTGAGTTTCCCCAGCCGGGTTTTCGACCGGCTGAGCGAGTGGAAGAAACGGGCCGCCGTTTGTCGGCTTATGCAGAAACTTTCAAGGTGCCGTTCGAGTACAATGCCGTAGCAAAAAACTGGGAGACTGTTACCATTGACGATCTCAAGATAGAAGGTGACGAAGTCTTGGTCGTCAACTGCCTGTACCGAGCAAAGAACTTGCACGACGAAAGTGTGGCAGTGGAAAGTGCCCGAAATAAGTTTCTTCAAGTTGTACGCAAAATAAATCCAAACATCTTCATCTTCGGTGCTGTCAACGGTTCGTATAATGCCCCCTTCTTCGTTACTCGTTTTCGAGAGGCACTCTTCCACTATTCTTCGCTGTTTGACATGCTTGAAACTGTCGTCCCGAGGGAGGATGGAGAGAGAATGTTGATCGAGAAGGAAATCTTTGGTCGAGAAGCTTTGAATGTTATTGCATGCGAAGGCTGGGAGAGAGTCGAAAGACCAGAGACCTATAAGCAGTGGCAGGTTCGAATCATGAGGGCCGGATTCTTGCAGCTTGAAGTAGACAGAGAGATAATAAAGGGTGCAAAGGAGAAAGTAAACACAAGTTACCACAAGGATTTTGTAATCGACGAAGATAGCAAATGGATGCTACAGGGATGGAAGGGAAGAACTATATATGCCCTCTCTGCTTGGAAACCTGTTTAG 2235 43.53 MDPRCKGYSYSIKDIQLSNQSLLVHPNPNAVVGPRFENAILDQRFDELHYLPLDPPPSNVVSSSSNITSSSSASHENSPEDCDFSDAVLGYISQILMEEDMEEKTCMLQDSLDLQAAEKSFYDVLGEKYPHDQNRCYSSQYNESLDDNSFGNYYNYLTNIYGESAYFGNDTHNKLLVEDFSQIDSLPSCFIDQSVYSSSNSVISSFDNGLVDSSNSSFSVPESSNGSQSIWQFRKGVEEANKFLPKENGLFLNQGAEAGEVVVKVETREGNELLPLESRGRKNPLREDGDLEEKRSNKLAAIFTDSTLRSEMFDNVLLCSAGEGMRKLAALRDYLQMAKRKTLEQNGQSKGYNGGRGRGKKQNRKKEVVDLRTLLIHCAQAVAADDHRNANELLRQIRQHSSPFGDGNQRLAHCFAEGLEARLAGIGSQIYKGLVSRRRCAADLLKAYHLYLAACPFRKMSNFTSNKTIMSIAANSSRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLSAYAETFKVPFEYNAVAKNWETVTIDDLKIEGDEVLVVNCLYRAKNLHDESVAVESARNKFLQVVRKINPNIFIFGAVNGSYNAPFFVTRFREALFHYSSLFDMLETVVPREDGERMLIEKEIFGREALNVIACEGWERVERPETYKQWQVRIMRAGFLQLEVDREIIKGAKEKVNTSYHKDFVIDEDSKWMLQGWKGRTIYALSAWKPV 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 47742313 47744547 - Bma020252.1 Bma04g01386 81755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01386 744 MobiDBLite consensus disorder prediction 344 364 - -
Bma04g01386 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 743 IPR005202 -
Bma04g01386 744 PANTHER SCARECROW-LIKE PROTEIN 9 42 743 - -
Bma04g01386 744 MobiDBLite consensus disorder prediction 57 78 - -
Bma04g01386 744 Pfam GRAS domain family 371 742 IPR005202 -
Bma04g01386 744 ProSiteProfiles GRAS family profile. 362 742 IPR005202 -
Bma04g01386 744 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01386 Bma-Chr4:47742313 Bma07g00096 Bma-Chr7:1717763 0 dispersed
Bma04g01386 Bma-Chr4:47742313 Bma03g00133 Bma-Chr3:1012298 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57237 PF03514 GRAS 4.20E-121 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01386 - - cit:102622070 942.954