Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01411 | ATCATGGGTGCGATAATTGCCGCCATAGCTGACGGAGTGCTGACGTTTATGTGGATTTTTTGTGCTTCCTCGATTGGGGTTCTTACTGCCGTCGTGTCCTCCGCCGTCGGAGTTTCCGGCCTTCCTCTCCCTTCCATATTCATAACCACTGTCATTATTTTCCTCCTCGTCTTCTTTTTCAACTTCGTCGGCAGCCTCTTGGGTGGGGCTAGCTTCAATCCCACCGGAACCGCCGCCTTCTACGCTGCTGGCCTTGGCCCCGATTCTCTAATTTCCATGGCCCTTCGCTTTCCTGCTCAGGCTGCCGGAGCTGTCGGGGGTGCGCTAGCGATCAAGGAGGTGATGCCGACACAGTACAAACACATGCTTGGCGGTCCTTCTCTGAAAGTTGAGGTCCATTCCGGAGCCATAGCCGAGGCAATTTTGACGTTTTTCATTAGCTTGGCCGTCCTTCTGATCGTGCTCAGAGGCCCCCGCAGCCCGCTTCTCAAGGCCTGGTTTCTGGCCATGACCACCGTTACCTTGATCATCTCTGGATCTTCTTATACAGGACCTTCCATGAATCCTGCAAATGCGTTCGGGTGGGCGTATGTGAACAACAAGCACAATTCCTGGGAGCACTTTTACGTCTACTGGATCAGCCCCTTTGCCGGTGCAATTATAGCCGCTTGGCTGTATCGGGCGGTGTTTGCTGCAGCTGCGCCGGTGAAACAGAAGAAAGCCTGA | 726 | 54.13 | IMGAIIAAIADGVLTFMWIFCASSIGVLTAVVSSAVGVSGLPLPSIFITTVIIFLLVFFFNFVGSLLGGASFNPTGTAAFYAAGLGPDSLISMALRFPAQAAGAVGGALAIKEVMPTQYKHMLGGPSLKVEVHSGAIAEAILTFFISLAVLLIVLRGPRSPLLKAWFLAMTTVTLIISGSSYTGPSMNPANAFGWAYVNNKHNSWEHFYVYWISPFAGAIIAAWLYRAVFAAAAPVKQKKA | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 48871349 | 48872935 | + | Bma020289.1 | Bma04g01411 | 81780 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01411 | 241 | SUPERFAMILY | Aquaporin-like | 5 | 232 | IPR023271 | - | |
Bma04g01411 | 241 | Pfam | Major intrinsic protein | 7 | 226 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PANTHER | AQUAPORIN SIP1-1 | 2 | 240 | - | - | |
Bma04g01411 | 241 | Gene3D | Glycerol uptake facilitator protein. | 3 | 240 | IPR023271 | - | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 169 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 209 | 229 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 92 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 53 | 77 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PRINTS | Major intrinsic protein family signature | 138 | 156 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01411 | 241 | PANTHER | AQUAPORIN SIP1-1 | 2 | 240 | IPR044222 | GO:0015250 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01411 | Bma-Chr4:48871349 | Bma08g01152 | Bma-Chr8:50551770 | 5.02E-12 | dispersed | |
Bma04g01411 | Bma-Chr4:48871349 | Bma04g01419 | Bma-Chr4:48950167 | 6.20E-28 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01411 | K09875 | - | zju:107404040 | 334.339 |