Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01419 ATGGCTTCTCCGTTTCGTCTAATCGTTTCCGATTTCATCCTGTCTTTCATGTGGGTATGGTCGGGAGCTCTGATTAAGATGTTTGCGTATGGCGTTCTTGATTTGGGTCGTGAAGTTAAGGGTGAGATCATCAAGGATGCTCTATCGGTTCTCAACATGTATTTCTTTGCGTATTTGGGCAGAGTCACTAATGGCGGATCTTATAATCCTGTCACTGTTTTAGCTCCTGCCATTTCGGGGGATTTTAGCGGCTTCCTGTTCACTGTTGGAACAAGAATTCCTGTCCAGGTAATCGGGTCGATATGTGGCGTTAATCTCATTGTTATGACCTTTCCTGACATAGGACGAGGGCCAAAACTCCATGTCGACATCTACCGTGGGGCTCTGACGGAAGGGTTGTTAACATTCACCATAGTTATGGTTTATCTTTTCGTCTCCGAAAAGCTCTCCGGAGGTTTCTACACCAAGACTTGGATTAAAAGCCTCTCCAAGTTGACTCTACATACTCTTGGCTCAGATCTAACTGGCGGTGTGATGAACCCGGCATCTGTGACCGGTTGGTTGTACGCTCGAGGGGACTATGCATCGAAGGAGAACATCCTTGTATACTGGATTGCTCCGATTGAGGCAACAGTGCTTGCCGTTTGGACATTTAGGTGGCTCAACCGCCAACCGAAAGATGAGAAACTAAAGGCGAAGCCCAAATCAGAGTGA 714 46.92 MASPFRLIVSDFILSFMWVWSGALIKMFAYGVLDLGREVKGEIIKDALSVLNMYFFAYLGRVTNGGSYNPVTVLAPAISGDFSGFLFTVGTRIPVQVIGSICGVNLIVMTFPDIGRGPKLHVDIYRGALTEGLLTFTIVMVYLFVSEKLSGGFYTKTWIKSLSKLTLHTLGSDLTGGVMNPASVTGWLYARGDYASKENILVYWIAPIEATVLAVWTFRWLNRQPKDEKLKAKPKSE 237
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 48950167 48951567 - Bma031148 Bma04g01419 81788
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01419 237 Gene3D Glycerol uptake facilitator protein. 2 234 IPR023271 -
Bma04g01419 237 PANTHER AQUAPORIN SIP2-1-RELATED 5 237 IPR044226 GO:0015267
Bma04g01419 237 SUPERFAMILY Aquaporin-like 5 229 IPR023271 -
Bma04g01419 237 PANTHER AQUAPORIN SIP2-1-RELATED 5 237 - -
Bma04g01419 237 Pfam Major intrinsic protein 6 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma04g01419 237 PRINTS Major intrinsic protein family signature 49 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01411 Bma-Chr4:48871349 Bma04g01419 Bma-Chr4:48950167 6.20E-28 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01419 K09875 - rcu:8289527 320.857