Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01419 | ATGGCTTCTCCGTTTCGTCTAATCGTTTCCGATTTCATCCTGTCTTTCATGTGGGTATGGTCGGGAGCTCTGATTAAGATGTTTGCGTATGGCGTTCTTGATTTGGGTCGTGAAGTTAAGGGTGAGATCATCAAGGATGCTCTATCGGTTCTCAACATGTATTTCTTTGCGTATTTGGGCAGAGTCACTAATGGCGGATCTTATAATCCTGTCACTGTTTTAGCTCCTGCCATTTCGGGGGATTTTAGCGGCTTCCTGTTCACTGTTGGAACAAGAATTCCTGTCCAGGTAATCGGGTCGATATGTGGCGTTAATCTCATTGTTATGACCTTTCCTGACATAGGACGAGGGCCAAAACTCCATGTCGACATCTACCGTGGGGCTCTGACGGAAGGGTTGTTAACATTCACCATAGTTATGGTTTATCTTTTCGTCTCCGAAAAGCTCTCCGGAGGTTTCTACACCAAGACTTGGATTAAAAGCCTCTCCAAGTTGACTCTACATACTCTTGGCTCAGATCTAACTGGCGGTGTGATGAACCCGGCATCTGTGACCGGTTGGTTGTACGCTCGAGGGGACTATGCATCGAAGGAGAACATCCTTGTATACTGGATTGCTCCGATTGAGGCAACAGTGCTTGCCGTTTGGACATTTAGGTGGCTCAACCGCCAACCGAAAGATGAGAAACTAAAGGCGAAGCCCAAATCAGAGTGA | 714 | 46.92 | MASPFRLIVSDFILSFMWVWSGALIKMFAYGVLDLGREVKGEIIKDALSVLNMYFFAYLGRVTNGGSYNPVTVLAPAISGDFSGFLFTVGTRIPVQVIGSICGVNLIVMTFPDIGRGPKLHVDIYRGALTEGLLTFTIVMVYLFVSEKLSGGFYTKTWIKSLSKLTLHTLGSDLTGGVMNPASVTGWLYARGDYASKENILVYWIAPIEATVLAVWTFRWLNRQPKDEKLKAKPKSE | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 48950167 | 48951567 | - | Bma031148 | Bma04g01419 | 81788 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01419 | 237 | Gene3D | Glycerol uptake facilitator protein. | 2 | 234 | IPR023271 | - | |
Bma04g01419 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 5 | 237 | IPR044226 | GO:0015267 | |
Bma04g01419 | 237 | SUPERFAMILY | Aquaporin-like | 5 | 229 | IPR023271 | - | |
Bma04g01419 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 5 | 237 | - | - | |
Bma04g01419 | 237 | Pfam | Major intrinsic protein | 6 | 217 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 201 | 221 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 88 | 107 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 130 | 148 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 161 | 183 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma04g01419 | 237 | PRINTS | Major intrinsic protein family signature | 49 | 73 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01411 | Bma-Chr4:48871349 | Bma04g01419 | Bma-Chr4:48950167 | 6.20E-28 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01419 | K09875 | - | rcu:8289527 | 320.857 |