Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01441 ATGGGTTTCTCAATTTCTATCTTCGATCAAAAGGGTTTCGTTCTTTTCTTGAATCTGTCGTTTCTCCTGGTCGGATTCGCCTTCTTTTGTATTCAGTTTAATTCTTCGGATGTTCATCTTCTTGGAAGCAGCCCAGTCTCTGTCAATGATCAGAACAACTGCACGAGTTTTCAGAATCTAGACGACTACAAGTCCAAGTGTTCTCGTCTTCAATCCAGTAACCCTTGTGTCTCCCAAGGCTATATCGACTATCTTTATCTTTTTTACTGCAACTTTGAGAGCTTTCCTTTTCTGGGTTATCTTCTTCTCTTCCTCTGGCTTTTAGTTCTGTTCTATGTTCTGGGTAATACAGCTTCTGAATACTTCTGCTCTTCGCTGGAAAGCCTGTCTAATTTAATGAAGTTATCACCCACCATAGCCGGCGTGACCTTGCTTTCTCTCGGAAATGGCGCCCCTGACGTTTTCTCTAGCCTTGTTGCTTTCATGGGCAAAGGCACTAATGAAATTGGCCTGGATTCAGTCCTTGGAGGCGCCTCCTTCGTTACCTGTGTAGTGGTCGGAATCATAAGTGTTTTGCTTCGCCGGAGAGAAATTCAGGTCGAAAAATTCGCTTTCATCAGAGATATTTGCTTCTTCATACTGGTTCTGTTATCTGTCTTAGTCATATTGATTCATGGCGAAATTAGTCTATGGGGGGCTATTGCCTTTTCTTCGATGTACATGCTTTACGTGGTCGTCGTTTATGTTTCTCGGGCAGAATCGACTCGTGTCGAAGAAGACCCCGAAAAGGGTAGTGATTTGAGAGCACCAATTCTAAATGGGAAACAGGAGGAAGAAGAAGAAGAAGAAGAAGCTTGCATAGAAGGTGCGATCTTTCCAATAACACCATCACCTGCTTGCCTTACCTTCCTTAGAATTCTAGATCTCCCCCTCTACCTGCCAAGAAGATTGACAATTCCAGTTATTTCCGACGATAAATGGTCGAAATTTTTCGCAGTTTCTTCCGTGTTTCTAGCTCCGATTCTTCTGTCAGCTCTTTGGGCATCTCAAAATGATTCCTACACAACCAAGCAAGACTTGGTGACCTATGGAGTTGGATTTCTGACAGGATTGTTCTTGGCAACTCTTGCATTTTTCACAACAGAGAGCTCAAACCCACCAAGGAAATGCTTATTTCCATGGCTATTAGGAGGTTTTCTAATGAGCATAACATGGAGTTACATCACAGCTCAAGAGTTAGTGGGTTTGCTAGTTTCAATAGGATATATAATTGGAGTAAGCCCTTCAATTCTAGGACTCACTGTCCTGGCATGGGGAAACTCACTTGGAGATCTCATTGCAAATTCAGCAATGGCCATGAATGGTGGACAAGAAGGAGCCCAAATAGCCATTTCAGGCTGTTATGCTGGTCCTATATTCAATGTCCTGTTTGGATTAGGGTTGTCTCTTGTAGGAGCTGCTTGGAGTTCATATCCATTGCCTGTTGAGATACCAAACAGTGCTCATCTTTGGAGAACAATGGGGGTTCTGATTGCAGGCTTGTTGTGGGCTCTTTTGGTGTTGCCAAGTAGAAAAATGAAACTTGATGGAGTTTTAGGAGGAGGGCTTCTGTTGTTGTACTTGATTTCTCTGTCTTTCATGTTGGTACAATTGATCGTCTTATAG 1665 42.88 MGFSISIFDQKGFVLFLNLSFLLVGFAFFCIQFNSSDVHLLGSSPVSVNDQNNCTSFQNLDDYKSKCSRLQSSNPCVSQGYIDYLYLFYCNFESFPFLGYLLLFLWLLVLFYVLGNTASEYFCSSLESLSNLMKLSPTIAGVTLLSLGNGAPDVFSSLVAFMGKGTNEIGLDSVLGGASFVTCVVVGIISVLLRRREIQVEKFAFIRDICFFILVLLSVLVILIHGEISLWGAIAFSSMYMLYVVVVYVSRAESTRVEEDPEKGSDLRAPILNGKQEEEEEEEEACIEGAIFPITPSPACLTFLRILDLPLYLPRRLTIPVISDDKWSKFFAVSSVFLAPILLSALWASQNDSYTTKQDLVTYGVGFLTGLFLATLAFFTTESSNPPRKCLFPWLLGGFLMSITWSYITAQELVGLLVSIGYIIGVSPSILGLTVLAWGNSLGDLIANSAMAMNGGQEGAQIAISGCYAGPIFNVLFGLGLSLVGAAWSSYPLPVEIPNSAHLWRTMGVLIAGLLWALLVLPSRKMKLDGVLGGGLLLLYLISLSFMLVQLIVL 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 49543030 49544694 + Bma020330.1 Bma04g01441 81810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01441 554 Gene3D - 328 550 IPR044880 -
Bma04g01441 554 Gene3D - 135 260 IPR044880 -
Bma04g01441 554 Pfam Sodium/calcium exchanger protein 104 248 IPR004837 GO:0016021|GO:0055085
Bma04g01441 554 Pfam Sodium/calcium exchanger protein 395 548 IPR004837 GO:0016021|GO:0055085
Bma04g01441 554 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 551 - -
Bma04g01441 554 PANTHER CATION/CALCIUM EXCHANGER 2 7 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01441 Bma-Chr4:49543030 Bma07g00573 Bma-Chr7:8002126 5.07E-147 dispersed
Bma04g01441 Bma-Chr4:49543030 Bma01g00264 Bma-Chr1:2214324 1.23E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01441 K13754 - csv:101204766 584.719