Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01448 ATGGGGAAGGCCGAGGAAGAGCAGCCACTGCCACCCACTTTGGGCTCGGAGCCGACGAACCACAATGTGGGAGGCCGATGCGGTTATGGGTGCGATAGAATTCGGAGGCTCATTGGGTTCAGATGCGTCCTCGTTCTAGTTCTCTCGGCTGCTGTTTTTCTTTCTGCCATATTTTGGTTGCATCCGTTCTTTCGTAACTCAGATCAGAAGGATCTGGATCTTGATTCCAAGTTCAAAGATCATGAAATTGTAGCAAGTTTTAATGTTGAGAAGCCTGTTTCATTTCTTAAAGACCATATCCTGCAGCTTGAGAATGACATTCTTGGAGAAATATATGTACCTTCGGCCAAGGTCGTTATCTTATCTATGGAACCTTTGGCCGGATCAAACGAAACGAAAGTCGTCTTTGCTGTTGACCCGGAAAGAAGTTATTCAGAAATACCCGAAATGTCATTAAGTTTGATCAGGGCATCTTTTGAAAGTTTGGTTATTAATCATCCTCCTCTTCGTCTCAGTACGGCCTTGTTTGGAGAGCCTACTTTCTTCCAGGTGCTGAAATTCCAGGGAGGAATTACGATTATTCCCCCGCAGAGTGCGTTTCTTTTGCAGAAGGTGCAAATCTATTTCAACTTCACATTGAACTTTTCCGTCTATCAAATTCAGCTGAAGTTCGATGAACTTAGAAGCCAGCTGAAGTTGGGACTAAATCTGGCTCCTTATGAGAACATGTATATTAGCTTATCGAACTCGAGAGGTTCGACTGTTGACGCACCGACCATCGTCCGACCATCTGTTCTCTTGGCAGTCGGGAATACTCCATTGACACAAAGACTAAAGCAGTTGGCTCAAACCATCACGGGTTCTGAACCGAAAAACCTTGGCCTGAATAACATGATATTTGGAAAGGTAAAGCAAGTCCACCTTTCATCGATTCTCAGGCACTCTCTCAATGGCTGTAACGGAAATGGCCCCACTTCGTCGCCTTCGCCCGCTCCCGGTCCCAGTGCCCATCACCACCATCTCCATCGCCACCATCATCACCATCATGATCACAATGGCGATCTGGCTCCTGATATTTCTCCTTCTCCTTCAACTGAGATGGGTCCACCACCTGGTAATCAGATAAGCGTGTCTGCTCCCAAAGACGGCACCCTTGCCCCTCGGATAAGCTCTCCTCCGCCTGAGAGAAGTTACGAAGGAAAGCCACCGAGCTGCCAAGACCATTATAAGAGATCTTCACAAAAGGCGAGAAAACCGGCTGATTTAGCTCCGGCTCCTTCGCCAAATATTTCTCCTCAACATCCGGCAGTTTCCCCTCGGGTTTATAGAAACCCATCAGCACCATCTCCTTCTATTCCTGCATCTAGTCCGCTCCCAAATGTAGTTTATGCCCATCTTCAACCTCCATCTACTAGTGATCATGGAAGGGAAACTGCTGACACAACGCCATCAGTTGCACCATCGCCATCTTTATGTAAGTTTCATTGA 1488 46.98 MGKAEEEQPLPPTLGSEPTNHNVGGRCGYGCDRIRRLIGFRCVLVLVLSAAVFLSAIFWLHPFFRNSDQKDLDLDSKFKDHEIVASFNVEKPVSFLKDHILQLENDILGEIYVPSAKVVILSMEPLAGSNETKVVFAVDPERSYSEIPEMSLSLIRASFESLVINHPPLRLSTALFGEPTFFQVLKFQGGITIIPPQSAFLLQKVQIYFNFTLNFSVYQIQLKFDELRSQLKLGLNLAPYENMYISLSNSRGSTVDAPTIVRPSVLLAVGNTPLTQRLKQLAQTITGSEPKNLGLNNMIFGKVKQVHLSSILRHSLNGCNGNGPTSSPSPAPGPSAHHHHLHRHHHHHHDHNGDLAPDISPSPSTEMGPPPGNQISVSAPKDGTLAPRISSPPPERSYEGKPPSCQDHYKRSSQKARKPADLAPAPSPNISPQHPAVSPRVYRNPSAPSPSIPASSPLPNVVYAHLQPPSTSDHGRETADTTPSVAPSPSLCKFH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 49662585 49665506 + Bma020340.1 Bma04g01448 81817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01448 495 MobiDBLite consensus disorder prediction 401 417 - -
Bma04g01448 495 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 492 - -
Bma04g01448 495 MobiDBLite consensus disorder prediction 336 350 - -
Bma04g01448 495 MobiDBLite consensus disorder prediction 465 488 - -
Bma04g01448 495 PANTHER F20B24.21 1 492 - -
Bma04g01448 495 MobiDBLite consensus disorder prediction 317 495 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01448 Bma10g00247 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02694 Bma-Chr1:84395474 Bma04g01448 Bma-Chr4:49662585 5.91E-151 transposed
Bma10g00247 Bma-Chr10:2278758 Bma04g01448 Bma-Chr4:49662585 5.72E-164 wgd
Bma04g01448 Bma-Chr4:49662585 Bma04g01695 Bma-Chr4:53221436 2.45E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01448 - - jre:109008135 535.798