Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01450 ATGGAAGGAAAAGGTTGTTTTGGCAATTTTGTGGAGAGAGCCAAACCTTACATCGCCATGATTTGTCTTCAGTTTGGCTATGCCGGCATGAATATAATCACTAAGGTTTCTCTTAATCGAGGAATGAGCCACTACGTACTGGTTGTTTACAGACATGCTTTCGCTACTGCCGCCATAGCTCCTTTTGCTCTTGTTCTTGAAAGGAAAGTTAGACCCAAAATTACATTCCCCATTTTCATGCAGCTTTTTGTTCTGGGTCTTCTTGGGCCAGTGATTGATCAAAACTTCTATTACGCTGGACTAAAGTTCACCTCCCCCACCTTCTCCTGCGCCATGAGCAACATGCTTCCTGCAATGACATTTGTCATGGCTGTCATTTTCAGAAGGATGGAGATATTGGACATGAAGAAACTAAGGTGTCAAGCAAAATTAGTAGGAACATTAGTGACAGTTGGTGGGGCCATGTTGATGACGTTATACAAAGGCCATGTCGTGAATTTCTTCTGGTCTGATCATCTTCACCATATCAGCTCCTCTGGAGATTCAGAGGGTGGGAATGGTGATAAAGATTGGGCTAAAGGATCCATTCTTCTGATTATTGCTACTCTTGCATGGGCTTCCTTTTTCATTCTTCAGGCTATAACGTTGAGAAGATATACAGCTCAGCTTTCACTTACTTCTCTGGTTTGCTTTATTGGGACTCTTCAATCCATTGGTGTTACCCTTGTAATGGAACGTAAGCCTTCTGCTTGGGCCATCGGGTGGGACATGAATCTTCTCGCTGCAGCCTATGCTGGGATAGTGTCGTCTAGCATTGCATACTATGTTCAAGGGCTGGTGATGCAGAAGAGAGGGCCAGTCTTCGTTACAGCATTCAGTCCATTGATGATGATAATAGTTGCTGTAATGGGTTCTTTCGTTCTTGCCGAGAAGATCTACCTTGGAGGGATTCTTGGAGGTGTACTGATAGTAATGGGCCTGTATGCAGTTCTGTGGGGGAAGTACAAAGAACACAAAGAGAAGGAAGCTGAGGAAGCCATTGTTGATCCAGTAAAAACTGGAGAAAATGGGAAGGCTATAGAGAAGATGGAAGAAGTCGATGACATAGAAATGCAGAAAAATAAAAACGTGTCCACTCCAATGGTGGCTGTTAGTTTTCCAGTTCCTCAGCCTCCCATGTTCGCAAAGGAAGCTCCAAGGTCTTAG 1206 43.95 MEGKGCFGNFVERAKPYIAMICLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFPIFMQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIFRRMEILDMKKLRCQAKLVGTLVTVGGAMLMTLYKGHVVNFFWSDHLHHISSSGDSEGGNGDKDWAKGSILLIIATLAWASFFILQAITLRRYTAQLSLTSLVCFIGTLQSIGVTLVMERKPSAWAIGWDMNLLAAAYAGIVSSSIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAVMGSFVLAEKIYLGGILGGVLIVMGLYAVLWGKYKEHKEKEAEEAIVDPVKTGENGKAIEKMEEVDDIEMQKNKNVSTPMVAVSFPVPQPPMFAKEAPRS 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 49702076 49703905 - Bma020344.1 Bma04g01450 81819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01450 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 161 - -
Bma04g01450 401 Pfam EamA-like transporter family 16 130 IPR000620 GO:0016020|GO:0016021
Bma04g01450 401 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Bma04g01450 401 PANTHER WAT1-RELATED PROTEIN 10 363 - -
Bma04g01450 401 PANTHER WAT1-RELATED PROTEIN 10 363 IPR030184 GO:0016021|GO:0022857
Bma04g01450 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00300 Bma-Chr3:2240766 Bma04g01450 Bma-Chr4:49702076 4.75E-108 dispersed
Bma03g00405 Bma-Chr3:3065559 Bma04g01450 Bma-Chr4:49702076 0 dispersed
Bma04g00745 Bma-Chr4:7999605 Bma04g01450 Bma-Chr4:49702076 9.81E-94 dispersed
Bma04g01450 Bma-Chr4:49702076 Bma08g00989 Bma-Chr8:48983945 1.67E-117 dispersed
Bma12g00355 Bma-Chr12:6040317 Bma04g01450 Bma-Chr4:49702076 1.13E-30 dispersed
Bma04g01450 Bma-Chr4:49702076 Bma01g02646 Bma-Chr1:83962891 3.19E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01450 - - jre:109021862 614.379