Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01459 | ATGTCAGATTTCAGAACGCTTGAGCAATCTCTTGGATTTCACGTAGAGAATGCTGTTGAACTTTCTAGAAATGCTGTTTATAATCAGATGAAGTCAAGTAATCCAATTCTAGGTACAGATAGCCAATTTAACTCTTTAAACAAGACATTAGACTTGCCAAAGGACAGACACCCGGATCCTGTTTCCACATCCATCACTCAACGTGAGAATTGGGGGGAGTCTAACATGGCGGATGGCAGCCCGATGACTGATACTTCAACGGATGACACTGATGACAAAAATCAGAGGTTTGATAGAAATCAATTAATTTTGGGTGGAGCATCCGATTCAAATAACGCATCAAAAGAAAAGTCGGGAGATCAAAAGACATTGCGCAGACTTGCTCAAAATCGTGAAGCTGCTAGAAAAAGCAGGTTAAGGAAAAAGGCTTATGTACAACAGCTAGAAAGCAGCAGGCTGAAGTTGACCCAGCTGGAGCAGGAACTGCAGCGGGCACGTCAACAGGGAATATTTATTTCGAGTTCAGGAGATCAATCACATTCGATGAGTGGAAACGGTGCATTAGCCTTCGACGTAGAATATTCTCGTTGGCTAGAAGAGCATAACAGGCAAGTGAATGAGTTGAGGACGGCGGTAAATTCTCACGTGGGAGACACCGAACTGCATACTATTGTCGATAACGTCACCGTACAGTTTGACGACATATTCAGGTTGAAAGGCATTGCGGCCAAAGCTGACGTTTTCCACATTTTGTCCGGAATGTGGCAAACCCCTGCCGAGAGGTGTTTCATGTGGATTGGTGGGTTCCGCTCATCTGAGCTTCTCAAGCTTCTTGCGAGTCAATTGGAACCCCTGACGGAGCAGCAGGCGATGGACATCTGCAAGCTCCAGCAGTCGTCACAACAGGCCGAAGACGCTCTTTCCCAAGGAATGGAAGCATTGCAGCAGTCCTTGGCCGAGACGCTGGCCAGTGGGTCCCCCGCATCTTCGGGGCCATCCGGCAACGTGGCAAATTACATGGGCCAAATGGCGATGGCCATGGGAAAGCTAGGAACTCTCGAAGGCTTCCTTCGCCAGGCCGATAATCTTCGACAACAAACGCTCCAGCAAATGCACAGGATTTTGACGATTCGGCAATCTGCTCGGGCTTTTCTCGCGATAAATGACTACTTTTCTCGACTCCGAGCCCTCAGTTCGCTCTGGCTGGCCAGGCCACGAGATTGA | 1224 | 48.2 | MSDFRTLEQSLGFHVENAVELSRNAVYNQMKSSNPILGTDSQFNSLNKTLDLPKDRHPDPVSTSITQRENWGESNMADGSPMTDTSTDDTDDKNQRFDRNQLILGGASDSNNASKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHSMSGNGALAFDVEYSRWLEEHNRQVNELRTAVNSHVGDTELHTIVDNVTVQFDDIFRLKGIAAKADVFHILSGMWQTPAERCFMWIGGFRSSELLKLLASQLEPLTEQQAMDICKLQQSSQQAEDALSQGMEALQQSLAETLASGSPASSGPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTIRQSARAFLAINDYFSRLRALSSLWLARPRD | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 50090361 | 50228309 | - | Bma031151 | Bma04g01459 | 81828 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01459 | 407 | Coils | Coil | 141 | 168 | - | - | |
Bma04g01459 | 407 | Pfam | Seed dormancy control | 204 | 280 | IPR025422 | GO:0006351|GO:0043565 | |
Bma04g01459 | 407 | SUPERFAMILY | Leucine zipper domain | 122 | 165 | IPR046347 | GO:0003700|GO:0006355 | |
Bma04g01459 | 407 | MobiDBLite | consensus disorder prediction | 63 | 84 | - | - | |
Bma04g01459 | 407 | Pfam | bZIP transcription factor | 122 | 162 | IPR004827 | GO:0003700|GO:0006355 | |
Bma04g01459 | 407 | SMART | brlzneu | 118 | 181 | IPR004827 | GO:0003700|GO:0006355 | |
Bma04g01459 | 407 | CDD | bZIP_HBP1b-like | 122 | 174 | - | - | |
Bma04g01459 | 407 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 125 | 140 | IPR004827 | GO:0003700|GO:0006355 | |
Bma04g01459 | 407 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 27 | 407 | - | - | |
Bma04g01459 | 407 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 120 | 164 | IPR004827 | GO:0003700|GO:0006355 | |
Bma04g01459 | 407 | PANTHER | TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 | 27 | 407 | - | - | |
Bma04g01459 | 407 | MobiDBLite | consensus disorder prediction | 47 | 125 | - | - | |
Bma04g01459 | 407 | Gene3D | - | 121 | 173 | - | - | |
Bma04g01459 | 407 | ProSiteProfiles | DOG1 domain profile. | 187 | 404 | IPR025422 | GO:0006351|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma04g01459 | Bma10g00236 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01459 | Bma-Chr4:50090361 | Bma15g00081 | Bma-Chr15:916771 | 3.77E-154 | dispersed | |
Bma07g01446 | Bma-Chr7:50182347 | Bma04g01459 | Bma-Chr4:50090361 | 5.13E-46 | dispersed | |
Bma10g00236 | Bma-Chr10:2162224 | Bma04g01459 | Bma-Chr4:50090361 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57247 | PF14144 | DOG1 | 4.70E-28 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01459 | K14431 | - | mnt:21386980 | 623.239 |