Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01468 GTAATGGGTCTCGTTGCTGAATCTCAGTTTCATGTTTTGGCCGTTGATGATAGTCTTATTGATCGAAAACTGATAGAAAGGCTGCTCAAGACCTCGTCGTATCAAGTCACTACTGTTGATTCTGGTTCTAAAGCTTTGGAATTTCTGGGTTTTAATCAAGATGATAAAACGAACGCCACTATTCCTTTGATTTCTCCGAATAAGGAAGTGGAAGTGAATCTTGTCATCACAGATTACTGTATGCCCGGAATGACAGGCTATGATTTGCTCAAGAAAATCAAGGAGTGTTCATCCTTGAGAAACATACCAGTAGTGATAATGTCGTCGGAGAATGTACCTTCGAGAATCACCAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTCTTGAAACCAGTTCGACTTTCAGACATGAACAGGCTGAAACCCCACATGATGAAAACCAGATCGAAGGATCAAGAACATGAAAATGGCGATGGATCAGAGAAAAACTGTCAATTTATAGAACAAAAACAGGCGAGTAATAAGAGGAAAGCCATGGAAGAAGGTCTTTCCCCTGATAGAACACGACCCAGATACAGTGGCATCGCCACCGTGATCTGA 600 41.83 VMGLVAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGFNQDDKTNATIPLISPNKEVEVNLVITDYCMPGMTGYDLLKKIKECSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDMNRLKPHMMKTRSKDQEHENGDGSEKNCQFIEQKQASNKRKAMEEGLSPDRTRPRYSGIATVI 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 50428558 50429582 + Bma020373.1 Bma04g01468 81837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01468 199 MobiDBLite consensus disorder prediction 173 187 - -
Bma04g01468 199 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 5 191 - -
Bma04g01468 199 CDD REC_typeA_ARR 12 140 - -
Bma04g01468 199 Pfam Response regulator receiver domain 12 137 IPR001789 GO:0000160
Bma04g01468 199 Gene3D - 11 191 - -
Bma04g01468 199 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 191 IPR045279 GO:0009736
Bma04g01468 199 MobiDBLite consensus disorder prediction 145 199 - -
Bma04g01468 199 SMART REC_2 10 144 IPR001789 GO:0000160
Bma04g01468 199 SUPERFAMILY CheY-like 9 141 IPR011006 -
Bma04g01468 199 MobiDBLite consensus disorder prediction 145 161 - -
Bma04g01468 199 ProSiteProfiles Response regulatory domain profile. 11 145 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01468 Bma10g00231 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02073 Bma-Chr1:76164242 Bma04g01468 Bma-Chr4:50428558 1.24E-55 dispersed
Bma03g00432 Bma-Chr3:3287956 Bma04g01468 Bma-Chr4:50428558 4.02E-39 dispersed
Bma04g01468 Bma-Chr4:50428558 Bma14g01751 Bma-Chr14:37731854 2.83E-56 dispersed
Bma10g00231 Bma-Chr10:2091556 Bma04g01468 Bma-Chr4:50428558 6.78E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57249 PF00072 Response_reg 1.20E-19 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01468 K14492 - tcc:18598779 301.982