Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma04g01468 | GTAATGGGTCTCGTTGCTGAATCTCAGTTTCATGTTTTGGCCGTTGATGATAGTCTTATTGATCGAAAACTGATAGAAAGGCTGCTCAAGACCTCGTCGTATCAAGTCACTACTGTTGATTCTGGTTCTAAAGCTTTGGAATTTCTGGGTTTTAATCAAGATGATAAAACGAACGCCACTATTCCTTTGATTTCTCCGAATAAGGAAGTGGAAGTGAATCTTGTCATCACAGATTACTGTATGCCCGGAATGACAGGCTATGATTTGCTCAAGAAAATCAAGGAGTGTTCATCCTTGAGAAACATACCAGTAGTGATAATGTCGTCGGAGAATGTACCTTCGAGAATCACCAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTCTTGAAACCAGTTCGACTTTCAGACATGAACAGGCTGAAACCCCACATGATGAAAACCAGATCGAAGGATCAAGAACATGAAAATGGCGATGGATCAGAGAAAAACTGTCAATTTATAGAACAAAAACAGGCGAGTAATAAGAGGAAAGCCATGGAAGAAGGTCTTTCCCCTGATAGAACACGACCCAGATACAGTGGCATCGCCACCGTGATCTGA | 600 | 41.83 | VMGLVAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGFNQDDKTNATIPLISPNKEVEVNLVITDYCMPGMTGYDLLKKIKECSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDMNRLKPHMMKTRSKDQEHENGDGSEKNCQFIEQKQASNKRKAMEEGLSPDRTRPRYSGIATVI | 199 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 50428558 | 50429582 | + | Bma020373.1 | Bma04g01468 | 81837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma04g01468 | 199 | MobiDBLite | consensus disorder prediction | 173 | 187 | - | - | |
Bma04g01468 | 199 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9 | 5 | 191 | - | - | |
Bma04g01468 | 199 | CDD | REC_typeA_ARR | 12 | 140 | - | - | |
Bma04g01468 | 199 | Pfam | Response regulator receiver domain | 12 | 137 | IPR001789 | GO:0000160 | |
Bma04g01468 | 199 | Gene3D | - | 11 | 191 | - | - | |
Bma04g01468 | 199 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 5 | 191 | IPR045279 | GO:0009736 | |
Bma04g01468 | 199 | MobiDBLite | consensus disorder prediction | 145 | 199 | - | - | |
Bma04g01468 | 199 | SMART | REC_2 | 10 | 144 | IPR001789 | GO:0000160 | |
Bma04g01468 | 199 | SUPERFAMILY | CheY-like | 9 | 141 | IPR011006 | - | |
Bma04g01468 | 199 | MobiDBLite | consensus disorder prediction | 145 | 161 | - | - | |
Bma04g01468 | 199 | ProSiteProfiles | Response regulatory domain profile. | 11 | 145 | IPR001789 | GO:0000160 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma04g01468 | Bma10g00231 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02073 | Bma-Chr1:76164242 | Bma04g01468 | Bma-Chr4:50428558 | 1.24E-55 | dispersed | |
Bma03g00432 | Bma-Chr3:3287956 | Bma04g01468 | Bma-Chr4:50428558 | 4.02E-39 | dispersed | |
Bma04g01468 | Bma-Chr4:50428558 | Bma14g01751 | Bma-Chr14:37731854 | 2.83E-56 | dispersed | |
Bma10g00231 | Bma-Chr10:2091556 | Bma04g01468 | Bma-Chr4:50428558 | 6.78E-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57249 | PF00072 | Response_reg | 1.20E-19 | CL0304 | Bma | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma04g01468 | K14492 | - | tcc:18598779 | 301.982 |