Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01510 ATGTTTTCGGCCATGGATGCTATGACTTTCAGCTGGTTCTTCTTCTTCTTCTTTATCCTCTGGAGTATCTCTTTTCTCCTGGTAAGCTGTTTTCTCAGATCAAATAGAAGGAATTCCCGACCCCCTCCTAGACCATTCTCTCTACCTCTCATCGGCCATCTTCATCTTCTAACCTCCAAACTGCCTCTATCCTTCCAAGCCCTAGCTCGCCGTTACGGCCCTCTCATGCAAATACGCATAGGACAAACAAGTTTCATCGTAGCTTCGAGTGCTGCAATGGCGAAAGAGATTTTCAAAACACAGGATATAAACTTTTCATCTAGATTTGAATTTGGCCCAGAATGCTACAACATCTACGCCGGATCTGGGTTCATCACCGGCCCTTACGGCTCGTACTGGAGATTCATGAAAAAGATAGCCATGACTAAGCTTTTCGCCGGACCGCAGCTTGAGAGGTTCAGCCGTATTCGAGAAGAAGAGATATGCAACCTTTTACAGTCCCTCGTTAGGGTTTCCAAAGAAGAAGAAGCTTGCAATCTGAGCGTGGAGATATCAACTATGACAAACTCGCTCTTTTTCAGAACGGCCATGAAAGAGAAATACTCCATTAACGACGCCATTTCAGACGAAACCAAGAGCATGAGGACCATAATCTCCGAAATAATGGAGCTTGCAGGAAAACTGAGTGTGAATCAGGTTTTCGGTCCTTTCAGAAAACTAGACCTGTTCGGCCATGGACGACGACTCGTCGAAGCTCTTTGGCGGTACGATGAACTGGTCGAAAAGATCATGACAACGTACGAAGATGATTTCTCGAGCAAACGAGACAAAGAAGAAACAGATCTGATGGATATTATCCTTGAAACATACAGAAATCCGAACGCAGAAGTCAAAATCACACGAAATCAGATCAAATTTTTCTTTTTCGAGCTGTTCATGGCGAGCATTGATTCTTTATCAGCAGCCATACAGTGGACCATGGGAGAGCTGATCAACCATCCGGAGGTAATCAAACGGCTGAGAGTCGAGATAGATTCGATCGTGGGGTCCTCCCGGCTGGTCAAAGGATCAGACGTCCCAGATCTTCCATACTTACAAGCCATCATAAAAGAAGCCTTGAGGCTCCACATGCCAGGGCCGTTGATTCACAGACAATGCACCTCTGATTGTAAGCTCAACGGCTATGATGTGAAAGCCACGGACAAAATCCTCATCAACGTCTACGCAATCATGCGGGACCCAGACAACTGGACGGATCCTGATGAGTTTGTTCCGGAAAGATTCAGTGGTCAAACGGAGATCAACGGTCATGATTTTCGCTACCTTCCGTTCGGAGGCGGGCGGCGAGTGTGCGCGGGGGCCAGTCATGCTTCAACGGTGATGCATGCCACAGTGGGGGCTCTGATCCAGTGCTTTGACTGGAATGTCAAGGGTGGGGACAAGGTTGATATAAATGTAGGGTCAGGATTTTCCGGGGCAATGGCAACCCCACTCTTGTGTTATGCTAAGCTACGCTTGGATCCAAACAACATGCCTTGTTAA 1542 47.08 MFSAMDAMTFSWFFFFFFILWSISFLLVSCFLRSNRRNSRPPPRPFSLPLIGHLHLLTSKLPLSFQALARRYGPLMQIRIGQTSFIVASSAAMAKEIFKTQDINFSSRFEFGPECYNIYAGSGFITGPYGSYWRFMKKIAMTKLFAGPQLERFSRIREEEICNLLQSLVRVSKEEEACNLSVEISTMTNSLFFRTAMKEKYSINDAISDETKSMRTIISEIMELAGKLSVNQVFGPFRKLDLFGHGRRLVEALWRYDELVEKIMTTYEDDFSSKRDKEETDLMDIILETYRNPNAEVKITRNQIKFFFFELFMASIDSLSAAIQWTMGELINHPEVIKRLRVEIDSIVGSSRLVKGSDVPDLPYLQAIIKEALRLHMPGPLIHRQCTSDCKLNGYDVKATDKILINVYAIMRDPDNWTDPDEFVPERFSGQTEINGHDFRYLPFGGGRRVCAGASHASTVMHATVGALIQCFDWNVKGGDKVDINVGSGFSGAMATPLLCYAKLRLDPNNMPC 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 51153552 51155179 - Bma020430.1 Bma04g01510 81879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01510 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 509 - -
Bma04g01510 513 PANTHER 3,9-DIHYDROXYPTEROCARPAN 6A-MONOOXYGENASE-LIKE 18 509 - -
Bma04g01510 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Bma04g01510 513 Gene3D Cytochrome P450 27 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 SUPERFAMILY Cytochrome P450 35 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 Pfam Cytochrome P450 42 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma04g01510 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01510 Bma-Chr4:51153552 Bma09g00984 Bma-Chr9:49367464 7.37E-93 dispersed
Bma10g00884 Bma-Chr10:16597625 Bma04g01510 Bma-Chr4:51153552 1.24E-66 dispersed
Bma04g01510 Bma-Chr4:51153552 Bma09g00854 Bma-Chr9:47568690 8.80E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01510 - - cit:102618288 619.002