Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01514 ATGGAGCCAACTGACGGGACAGCTACTAGATCGAGCACCAACGGGCGTTTGCCGGACGAAAGTGGGCTTCAATCACTCCAATTTCGTCAAGAAATTCAGAGATTGATCACCGCACCGCCGGAAAATGGTACTTCATTCACTGCGCTTCTGGAACTTCCGGCAACGCAGGCGATGCAACTCCTCAACTCGTCGAACTCCGATGAGGTCTCGAAGAGAGTGATTCTTTTCAATGGCTACCACAAACCCTCCTTCCATCCTTTCAGTGATAATTTGACTGCTCCTCCCTGCTCATCTCCGGAACAGAACGCCGGGAAGTTTTCCGGCTTCGTCGGGACGGCAAACTCGGGGCCGTCAAACTCGAATGCGAGTTTGGAGAAGGTGAAAAGCGAGCCCATCGCAGAGAACAATGCGACGCCCAACTCATTACAGCCGTCGATCTTCGATCCATCGGTGGAAAACGCGAATCAGAAGCCTGCAAAGAGAAAGGAGCGCGAGAAGAAGGGCAAAGGATCAGCAACAAAGAAGAGCAAAACCGAACAATCAGATGATTCGGAAAAGCTTCCATACGTTAACGTCCGAGCTCGCCGCGGTCAAGCGACAGATAGCCATAGTCTAGCAGAGAGAGCGAGGAGAGAGAAGATAAATGCTCGAATGAAATTGCTACAGGAGCTGGTCCCCGGATGCAATAAGTTGTGTATTGTTTGTCAAAATATTTCTTTATTTATTTTAAATCAGATTTCGGGAACGGCTTTAGTTCTTGACGAAATTATCAACCATGTGCAGTCCTTGCAACGCCAAGTCGAGTTCTTGTCAATGAGACTTGCAGCCATCTATCCAAGAATTGATTTCAATCTTGACAGTTTTTTTGCTGCAGAAAGTGAATCTCTTCTGACTAGTAGTTTCAACAGCGTGGTTACACCTGTTATGTGGCCAAATGGTCCTCCCAGTGGAAACAGACAACATTACCACCATCAATGGCATCTCGACTCAGTTTTGCAGGGAACTTGGGTAAGACAGGAAGATAATCAAAATCTCGTAACTCCACAGAGCTCGCTATTGACTTACGACTCCTCGCCACTTTCTAGTACGTAA 1092 47.53 MEPTDGTATRSSTNGRLPDESGLQSLQFRQEIQRLITAPPENGTSFTALLELPATQAMQLLNSSNSDEVSKRVILFNGYHKPSFHPFSDNLTAPPCSSPEQNAGKFSGFVGTANSGPSNSNASLEKVKSEPIAENNATPNSLQPSIFDPSVENANQKPAKRKEREKKGKGSATKKSKTEQSDDSEKLPYVNVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKLCIVCQNISLFILNQISGTALVLDEIINHVQSLQRQVEFLSMRLAAIYPRIDFNLDSFFAAESESLLTSSFNSVVTPVMWPNGPPSGNRQHYHHQWHLDSVLQGTWVRQEDNQNLVTPQSSLLTYDSSPLSST 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 51170854 51174093 + Bma020434.1 Bma04g01514 81883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01514 363 MobiDBLite consensus disorder prediction 91 126 - -
Bma04g01514 363 MobiDBLite consensus disorder prediction 133 152 - -
Bma04g01514 363 MobiDBLite consensus disorder prediction 155 190 - -
Bma04g01514 363 Pfam Helix-loop-helix DNA-binding domain 202 226 IPR011598 GO:0046983
Bma04g01514 363 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 13 357 IPR024097 GO:0006355
Bma04g01514 363 MobiDBLite consensus disorder prediction 91 207 - -
Bma04g01514 363 MobiDBLite consensus disorder prediction 1 24 - -
Bma04g01514 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 263 IPR011598 GO:0046983
Bma04g01514 363 CDD bHLH_AtBPE_like 188 288 - -
Bma04g01514 363 Coils Coil 253 273 - -
Bma04g01514 363 PANTHER TRANSCRIPTION FACTOR BHLH60 13 357 - -
Bma04g01514 363 SMART finulus 204 269 IPR011598 GO:0046983
Bma04g01514 363 Gene3D - 198 275 IPR036638 GO:0046983
Bma04g01514 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 281 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01514 Bma04g00462 CCT
Bma04g01514 Bma10g00270 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01514 Bma-Chr4:51170854 Bma10g00270 Bma-Chr10:2454758 3.33E-142 dispersed
Bma10g00191 Bma-Chr10:1706177 Bma04g01514 Bma-Chr4:51170854 1.49E-167 wgd
Bma04g00462 Bma-Chr4:3861749 Bma04g01514 Bma-Chr4:51170854 7.09E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57254 PF00010 HLH 0.0001 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01514 - - zju:107432409 385.571