Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma04g01537 | ATGGAAGCCGCCGGCGCCTTCGAGTTCTTAGCCTCGATAGTGGCGTCCTCCGTTTCTGACTCACCGTCAGAAGATTCCGGCGATGTTTTTGAACGCACTCGAGCGTGTGATGAGGCTTTGAGTATTCTGCATAATCTTCAAATCTTCGAAGCAGGAATGAAAACTCTCGTCGCAAAGAAAGGAGAATTCGTCGAAACGCTAGTCAAAGTAATGCACCAAGGAAGCTACGATTCAAGAGCCTATGCAACTATGTTACTGAAATCATTACTGGAACACGCCGATCCGATAAACCTAGCCAATCTTAGAGTCGAGTTCTTTGCCGAAATAATTCAAGTTCTCAAAGATCAAATCTCCCACAAGTGTTCCATATCTGCACTGAAAATGCTCATAAACCTCCTCCCATGGGGGAGAAATCGGATAAAAGCCGTCGAGGCCGGTAGCGTAGTAGTTCTAATCGAGCTTCTTCTCAGCTCCACAGAGCGCCGGCCATGTGAGATGGCGCTCACAGCCTTAGACTTGCTATGTGGGTGCGCCGAAGGGCGGGCGGAGTTGCTCCACCACGGAGCGGGGATGGCGGTGGTGTCGAAGAAGATTCTCAGAGTTACTCAGGTGGGAAACGAGAAAGCCGTCCGGATTCTGAATTCGATAGCGAAATATTCGGCAACTCCTGCCGTTCTTCAGGAAATGCTGAGTCTGGGTGTCGTCGCAAAACTGTGCCTGGTTCTTCAGGTGGAATGTGGAAGCAAGACGAAGGAGAAAGCGAGGGAGATTCTAAAGCTTCACTTTCGTTCATGGCGGAATTCGCCATGCATTCCTGCTACTTTGCTGTCATCTTATCCATCTTCTTGGGATTAA | 855 | 49.24 | MEAAGAFEFLASIVASSVSDSPSEDSGDVFERTRACDEALSILHNLQIFEAGMKTLVAKKGEFVETLVKVMHQGSYDSRAYATMLLKSLLEHADPINLANLRVEFFAEIIQVLKDQISHKCSISALKMLINLLPWGRNRIKAVEAGSVVVLIELLLSSTERRPCEMALTALDLLCGCAEGRAELLHHGAGMAVVSKKILRVTQVGNEKAVRILNSIAKYSATPAVLQEMLSLGVVAKLCLVLQVECGSKTKEKAREILKLHFRSWRNSPCIPATLLSSYPSSWD | 284 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 51425901 | 51426755 | - | Bma020457.1 | Bma04g01537 | 81906 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma04g01537 | 284 | Gene3D | - | 1 | 269 | IPR011989 | - | |
| Bma04g01537 | 284 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PUB23 | 1 | 281 | - | - | |
| Bma04g01537 | 284 | SUPERFAMILY | ARM repeat | 40 | 254 | IPR016024 | - | |
| Bma04g01537 | 284 | PANTHER | WDSAM1 PROTEIN | 1 | 281 | IPR045185 | GO:0061630 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma04g01537 | Bma-Chr4:51425901 | Bma07g00208 | Bma-Chr7:2523075 | 1.12E-99 | dispersed | |
| Bma10g00130 | Bma-Chr10:1174608 | Bma04g01537 | Bma-Chr4:51425901 | 1.19E-134 | wgd | |
| Bma11g00250 | Bma-Chr11:2202280 | Bma04g01537 | Bma-Chr4:51425901 | 4.95E-92 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma04g01537 | - | - | mnt:21399943 | 355.91 |