Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01600 ATGCTCGGAGTGAGATCGAACTACACGCTTTTAAGTCAAATTCCAGATGACGAGTTCGGTGGCGGAGCTTCTGCGGTTGGGTCCGGAGTTCAGGCGGCGTTTTACGAGCCCTTGTCGGGCGAGGGTAAGAATAATAAGGGAAAGGCAGAGAGAGGGTTGGATTGGGATGGGAGTGGTGATCATAGGGTGAACCAACCGGGGAATTGGATCGGGAACTTGTATTCGTCGATCGGGTTGCAGAGGCAGTCCAGTGGGAGCAGCTTCGGAGAGAGCTCTCTCTCGGGAGATTATTATGCACCAACTCTGTCTACTGCTGCGGGCAACGAGTTCGATAGCTTTGGATATATCCAGGACGATGTAATCAGAATTGGAGGTGGAGGTGTGGAGGATGAATTAAGGGCAAAAGCAGTGGAGCCGGCTGTTGGAACGGGAGGGTCATCAGGTAAGAGCTGGGCGCAGCAGACCGAGGAGAGTTATCAGTTACAGTTAGCCTTAGCTCTTCGTATTTCATCGGATGCGACTTGTGCCGATGATCCCAACTTCTTGGATCCTGTACCAGATGAATTGTTCGTAAGGTCTTCGTCAAGTTCGGCTGAGGTTCTGTCACATCGATTTTGGGTAGTGATTTTGTTATATGTGCTAGCCGATGCAATAGATTTACCCTGTCGAATTGCTAAGGGTTGTAAGTATTGCACAAGAGGAGATGCTTCCTCTTGTGTTGTTCGATTTGGGCTTGAGAGAGAGTATCTGGTTGATTTGGTTGGCAAGCCAGGCTGCTTATGCGGGCCGGATTCTCTGCTTAATGGTCCATCATCCATATTAATTTCTTCTCCATTGCGCTTTCCACCTCTAAAACCATTTGAGCCTACTACTGATTTTGGGTTGCTTGCAAAACAGTATTTCTTGGATTGTCCATCACTTAACATCGAATTTGATGAAACTTCTGCAGGTGATTTTTTGACCTTGGAACCAACAGTTTTTATAGCTATGCCATCCATGCATCAGGAAATATTCACAGAAGTCTACAACTTAATACACTTTCCAGGTGACAACGAGGAAAATTCTCGAATGCTGCAACCGAAAGCTTCACAGCTTACTTCCCAACATAGAGAGTCTCGTCCATTTCAATCATGTGATACTTCTCATGATGTTACACAGGCAACATCCTTGTTCAAAGATCCAAACCCTGAAAAGCATGTCCCACAGTTCATTCATAGGGAGCTCCCACAATTTTTGGCAGTTTCTCATACCAGGATGGATTCTACAAGAAATTACAGGTTTAATGAGGGAGGTGGACTTTTTTCTAGCAAAGCTAGTCAAGAAATTGCCCTTGATGTAGAAGATTTGGACATTCCGTGGAGCGATCTTGTTTTAAAAGAGAACATTGGATCTGGTTCTTTTGGAACTGTCCATCTAGCGGATTGGCATGGCTCGGATGTGGCAGTGAAGATTCTTATGGAGCAAGATTTTCATGCTGAGCGTTTCAAAGAATTTTTGAGGGAGGTTGCAATAATGAAACGCCTTCGGCATCCCAACATTGTTCTGTTTATGGGTGCAGTGACTCAACCCCCAAATTTGTCCATAGTCACTGAATATCTGTCAAGAGGTAGCTTGTATAGACTATTGCACAAACCAGGAGCCAGAGAAGTTTTAGACGAGAAACGCAGATTAAATATGGCTTATGATGTGGCCAAAGGTATGAATTATCTTCATAGGCGTAATCCTCCCATCGTTCATCGTGATTTAAAATCTCCAAATCTTTTGGTTGACAAGAAGTATACGGTGAAGGTTTGTGATTTTGGCCTTTCTCGATTAAAGGCAAATACATTTCTTTCATCAAAGTCAGCTGCTGGCACTCCGGAGTGGATGGCACCTGAAGTTCTACGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGCTTTGGAGTGATCTTGTGGGAGCTCGCTACAATGCAACGGCCATGGAATAATTTAAACCCAGCACAGGTTATAGCAGCTGTTGGCTTTAAGGGAAAAAGGCTAGAAATCCCACGTGGTTTAGATTCTAAAGTGGCTTCCTTAATTGAGGCTTGCTGGGCAAAGTAA 2088 44.73 MLGVRSNYTLLSQIPDDEFGGGASAVGSGVQAAFYEPLSGEGKNNKGKAERGLDWDGSGDHRVNQPGNWIGNLYSSIGLQRQSSGSSFGESSLSGDYYAPTLSTAAGNEFDSFGYIQDDVIRIGGGGVEDELRAKAVEPAVGTGGSSGKSWAQQTEESYQLQLALALRISSDATCADDPNFLDPVPDELFVRSSSSSAEVLSHRFWVVILLYVLADAIDLPCRIAKGCKYCTRGDASSCVVRFGLEREYLVDLVGKPGCLCGPDSLLNGPSSILISSPLRFPPLKPFEPTTDFGLLAKQYFLDCPSLNIEFDETSAGDFLTLEPTVFIAMPSMHQEIFTEVYNLIHFPGDNEENSRMLQPKASQLTSQHRESRPFQSCDTSHDVTQATSLFKDPNPEKHVPQFIHRELPQFLAVSHTRMDSTRNYRFNEGGGLFSSKASQEIALDVEDLDIPWSDLVLKENIGSGSFGTVHLADWHGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREVLDEKRRLNMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATMQRPWNNLNPAQVIAAVGFKGKRLEIPRGLDSKVASLIEACWAK 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 51913916 51923695 - Bma020527.1 Bma04g01600 81969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01600 695 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 209 694 - -
Bma04g01600 695 Pfam Protein tyrosine and serine/threonine kinase 457 694 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 139 207 - -
Bma04g01600 695 PRINTS Tyrosine kinase catalytic domain signature 571 589 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PRINTS Tyrosine kinase catalytic domain signature 530 543 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PRINTS Tyrosine kinase catalytic domain signature 618 628 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PRINTS Tyrosine kinase catalytic domain signature 681 695 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PRINTS Tyrosine kinase catalytic domain signature 637 659 IPR001245 GO:0004672|GO:0006468
Bma04g01600 695 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 207 - -
Bma04g01600 695 CDD STKc_MAP3K-like 462 695 - -
Bma04g01600 695 MobiDBLite consensus disorder prediction 39 61 - -
Bma04g01600 695 ProSitePatterns Protein kinases ATP-binding region signature. 462 483 IPR017441 GO:0005524
Bma04g01600 695 Gene3D Phosphorylase Kinase; domain 1 449 534 - -
Bma04g01600 695 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 209 694 - -
Bma04g01600 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Bma04g01600 695 SUPERFAMILY Protein kinase-like (PK-like) 441 694 IPR011009 -
Bma04g01600 695 Gene3D Transferase(Phosphotransferase) domain 1 535 695 - -
Bma04g01600 695 ProSiteProfiles Protein kinase domain profile. 456 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01600 695 Pfam Ethylene-responsive protein kinase Le-CTR1 209 261 - -
Bma04g01600 695 SMART serkin_6 456 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01600 695 MobiDBLite consensus disorder prediction 43 58 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01600 Bma10g00075 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00428 Bma-Chr4:3515283 Bma04g01600 Bma-Chr4:51913916 3.30E-144 dispersed
Bma04g01600 Bma-Chr4:51913916 Bma06g00066 Bma-Chr6:1049558 4.34E-08 dispersed
Bma07g01640 Bma-Chr7:51999009 Bma04g01600 Bma-Chr4:51913916 3.52E-90 transposed
Bma10g00075 Bma-Chr10:773719 Bma04g01600 Bma-Chr4:51913916 1.72E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66482 PF07714 PK_Tyr_Ser-Thr 2.00E-65 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01600 K14510 - qsu:112039665 718.383