Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01625 ATGGCTGCGTTATTCAACCCAGAATCCTATATCTACTCCTCCCCTCGACCTCCCATCGTCTTCCCCACCAATCCTAACCTCTCCATTACCTCGTTTCTCTTTCAAAAAACCTCCTCTTTCCCTCACAGAATCGCTCTCATCGATGCTGAAAATGGCGAAAGCTTGACCTTCCACCAGCTGAAAGTCCATGTTTCCAAGCTCTCCCAGGCTCTACTTCGGCTCGGAATCGAAAAGGGCAGTGTCGTCCTCATCTTCGCTCCTAACTCAGTTTACTTCGCTGTATCTTTCTTCGCCGTTGTCGCCATAGGAGCTATAGCAACGACCTGCAATCCTTCTTATACTGTACCGGAGCTTTTGAAGCAAGTTAAGGACTGTAACCCTAAGCTTATAATCACTGTTCCCGAACTTTGGGAGAAGGTCTGTTCATTGAATTTGACGTCAATATTTCTGGAGTCTCCGATTTCCTCGGATTTTCCGATACACCGGATTCCCAGTGTCTGGTTTTACTCCGATTTAGTCGCGAAATTAAGTGAATCATCGGAGATTCCAGATAATAACGTCGTTCAGAATGATATAGCCGCGTTTCTGTACTCGTCCGGGACGACGGGGACTAGCAAGGGGGCGATTCTTACGCACAGAAACTTCATCGCATCGTCGTTAATCGCGACGGGGGATCAGGACAGTCAAGGCGACGGGATGAACGTCATTCTATGCTTCTTGCCGATGTTTCATGTGTACGGACTGGTGATTCTACTTTACGCGCAGCTTGCGAGAGGGAACCGAGTGGTGTCAATGGCGAAGTTTGAGCTCGAGACGGCGATGAAGACGGTGGAGAAATACCGGATTACCCATCTCTACGCCGTTCCGCCGGTGATGATTGCTCTGGCGAAGGGAAGCACGGTGAAGAAGTACGATTCGTCGTCTTTGACGCAGATTGCATCAGGGGCGGCTCCTCTAGCGAATGATGTGATTGAAGCGGTTGCAAAGAATTTCCCCAACGCTAAAATTCTTCAGGGATATGGAATGACTGAAACTTGTGGAGTTCTTTCAAGGGTAGCTCCAACGGAAAGATCAAGCCTCTCATGTTCAACCGGAACGCTCTCGTCGGGAATCGAAGCCAAAATCATCGATGTCGATACTTTGAAGCCTCTTCCTCCTCGGCATTTAGGAGAAATATACGTCCGAGGACCAAGTATCATGCAAGGTCTGGATTTTTTTTTGGATGATAATGAATTATCTGACTATTGGGAAAAGCCATTTTCAGGATATTTAAACAATGTGGAGGCCACAAAGCTGACTATTGATGATCAAGGGTGGCTGCATACCGGAGATCTTGGATATTTCAACGATGCGGGAGAGCTGTTCGTTGTGGATCGAATCAAAGAACTCATAAAATGCTATGGTTTTCAGGTTGCACCGGCAGAGCTTGAAGGGATATTGCTTGCTCACCCTGAGATTATCGACTGCAGATGTCCAGAAGCAAAAGCCGGCGAGGTGCCAATTGCATTTGTCATTAAATCGACGAATAGCTCAATCACATCCGAAGATGTTCAGAAATTCGTCGCGAATCAGGTCGCACCGTTCAAAAGATTACGAAGTGTAACTTTTGTAAACAACATACCGAAATCGGCATCTGGGAAGATTTTGAGACGGGAGGTGATTCGAATGGTCCGAGCTAGAATGTAA 1686 47.09 MAALFNPESYIYSSPRPPIVFPTNPNLSITSFLFQKTSSFPHRIALIDAENGESLTFHQLKVHVSKLSQALLRLGIEKGSVVLIFAPNSVYFAVSFFAVVAIGAIATTCNPSYTVPELLKQVKDCNPKLIITVPELWEKVCSLNLTSIFLESPISSDFPIHRIPSVWFYSDLVAKLSESSEIPDNNVVQNDIAAFLYSSGTTGTSKGAILTHRNFIASSLIATGDQDSQGDGMNVILCFLPMFHVYGLVILLYAQLARGNRVVSMAKFELETAMKTVEKYRITHLYAVPPVMIALAKGSTVKKYDSSSLTQIASGAAPLANDVIEAVAKNFPNAKILQGYGMTETCGVLSRVAPTERSSLSCSTGTLSSGIEAKIIDVDTLKPLPPRHLGEIYVRGPSIMQGLDFFLDDNELSDYWEKPFSGYLNNVEATKLTIDDQGWLHTGDLGYFNDAGELFVVDRIKELIKCYGFQVAPAELEGILLAHPEIIDCRCPEAKAGEVPIAFVIKSTNSSITSEDVQKFVANQVAPFKRLRSVTFVNNIPKSASGKILRREVIRMVRARM 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52195432 52198054 - Bma020555.1 Bma04g01625 81994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01625 561 Gene3D - 10 461 IPR042099 -
Bma04g01625 561 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 558 - -
Bma04g01625 561 CDD 4CL 21 552 - -
Bma04g01625 561 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Bma04g01625 561 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 558 - -
Bma04g01625 561 SUPERFAMILY Acetyl-CoA synthetase-like 15 559 - -
Bma04g01625 561 Pfam AMP-binding enzyme 36 402 IPR000873 -
Bma04g01625 561 Pfam AMP-binding enzyme 420 466 IPR000873 -
Bma04g01625 561 Pfam AMP-binding enzyme C-terminal domain 475 547 IPR025110 -
Bma04g01625 561 Gene3D - 462 560 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01625 Bma-Chr4:52195432 Bma14g00445 Bma-Chr14:5144008 0 dispersed
Bma04g01625 Bma-Chr4:52195432 Bma07g01477 Bma-Chr7:50405268 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01625 K01904 - qsu:112025709 681.404