Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01639 ATGTTGACGATGCCGGACTTCCTGCGACTTTTTTCTGTCACTGTTATCTTCTTTTTCTCTGGTTTGTTCTTTTGCCGTTTGGAGAATGTTGTGGCAGATACAACCTCGGATTTTGACTTCGGGAGCTTGACTCTGACCAGTTTGAAGCTTCTCGGAGATGCCCACTTTAACAACGGAAGTGTTCGGCTCACTCGTGATCTCGCCGTTCCCAACTCCGGTGCCGGCAGAGTACTCTACTCTCGACCCATTAGGTTCCGCCAGCCCGGAACTCATTTCCCGGCTAGCTTCTCCACTTTTTTCTCCTTTTCTGTCATGAATCTAAACCCATCTTCGATTGGAGGCGGACTTGCATTTATAATCTCCCCGGACGACGAAACAGTCGGTGGCGCCGGAGGCTTGCTAGGACTAGTTGACGAAAAGAGCTCTACGATGCGATTCGCAGCGGTTGAATTCGACACTCTAATGGACGTCGAATTCAAAGACATTAACGGAAATCACGTCGGATTGGATCTGAGTAGTATGGTTTCGATGCAAGTGGCCGATCTGGAAATGATCGGAGTTGAGTTAAAGAGCGGCAATTTAGTGAACTCGTGGATAGAGTACGACGGGTTGACTCGAGTTTTCAACATTTCGGTTTCGTATTCAAATCTGAAACCAAAAGATCCGATTTTATCAATTCCGCTCGATCTGGATCAGTTCGTAAACGATTTCATGTTCGTCGGATTCTCCGGGTCGACCCAGGGCAGCACAGAAGTTCACAGTATAGAGTGGTGGAGCTTCACCTCCTCTTTCGACTCCTATTCTCCGGTCGGATCAGTGACTCCGCCGCCTCCAATGGAGACTCTAATGAACCCGACGGCGAACTCCGTTACTTCTTCTCCCCCTCCTTCAATTCCTCCTGCTGTTTCTGATTCAATTTCTCAGAAAAACAGCAAGTCTTCCTCTTGCCATAATCAGCTCTGTAAACAAGGTCCCGGCGCTATCGTAGGAGTGACAACGGCCGGAGCATTCGTTCTAGCTCTTTTCGGCGGAGCTATAATCTGGGTATATTCTAAAAAGTTCAAACATGTCAAAAAAACTGATTCTTTTCCGGATATCATCAAAATGCCGAAAGAATTCAGCTACAAAGAGCTTAAAACCGCCACGAAATGCTTCTACGCCAGCAGAATCATCGGCCACGGCGCATTTGGGACGGTTTATAAAGGAATCCTACCAGAAACCGGCGATATCGTCGCCGTGAAAAGGTGTAATCATAACAGTCAGGGGAAGAATGAATTTCTTTCTGAATTATCAATTATAGGTACTCTTAGGCATCGAAATTTAGTTCGACTTCAAGGGTGGTGCCACGAGAAAGGCGAAATTCTTCTAGTCTACGATTTAATGCCAAATGGAAGCCTGGATAAAGCGTTGTTCGAATCAAGAACACCTCTCCCATGGCCGCACCGGAAGAAAATTCTGCAGGGCGTTGCTTCTGCGCTAGCGTATTTACATCAAGAATGCGAAAACCAGGTGATCCACAGAGACATCAAAACCAGTAACATTATGTTAGACGAAGGCTTCAACGGCCGGCTGGGGGATTTCGGGTTAGCTAGACAGATTGAGCACGATAAGTCGCCGGAGGCCACAGTTGCCGCCGGAACAATGGGCTACCTAGCGCCGGAGTATCTCCTAACAGGAAGAGCTACAGATAAAACCGACGTTTTCAGCTACGGAGCGGTGGTTCTGGAAGTGGCAAGTGGAAGAAGACCAATTGAAAAGGAAGTAAGTGTGGTTGGGAAAGTCGGCGTGAGTACTAATTTGGTGGAATGGGTTTGGAGCTTGCACAGAGAAGGGCGGTTGTTAATGGCGGCCGACGGGAGACTGGGGGGTGAGTTCGATGAAGGGGAAATGAGAAGGGTGCTGTTGATTGGGTTAGCTTGTTCGCACCCTGATCCGATGGCTCGACCGTCGATGAGGACCGTGGTTCAGATGCTCGCCGGCGAAGCTGAAATTCCGTTAGTGCCTAGAACTAAGCCTTCCACCAGCTTCAGTACTGCTCATCTTCTCCTCAGCTTGCAGGACAGCGTGTCTGATCTTAACGGTATGATCGCCATTTCCGACACCTCCTCTGAACGGAGCTTCGACGGTCGTCCTTTAGTCTAA 2142 48.6 MLTMPDFLRLFSVTVIFFFSGLFFCRLENVVADTTSDFDFGSLTLTSLKLLGDAHFNNGSVRLTRDLAVPNSGAGRVLYSRPIRFRQPGTHFPASFSTFFSFSVMNLNPSSIGGGLAFIISPDDETVGGAGGLLGLVDEKSSTMRFAAVEFDTLMDVEFKDINGNHVGLDLSSMVSMQVADLEMIGVELKSGNLVNSWIEYDGLTRVFNISVSYSNLKPKDPILSIPLDLDQFVNDFMFVGFSGSTQGSTEVHSIEWWSFTSSFDSYSPVGSVTPPPPMETLMNPTANSVTSSPPPSIPPAVSDSISQKNSKSSSCHNQLCKQGPGAIVGVTTAGAFVLALFGGAIIWVYSKKFKHVKKTDSFPDIIKMPKEFSYKELKTATKCFYASRIIGHGAFGTVYKGILPETGDIVAVKRCNHNSQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFESRTPLPWPHRKKILQGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNGRLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRATDKTDVFSYGAVVLEVASGRRPIEKEVSVVGKVGVSTNLVEWVWSLHREGRLLMAADGRLGGEFDEGEMRRVLLIGLACSHPDPMARPSMRTVVQMLAGEAEIPLVPRTKPSTSFSTAHLLLSLQDSVSDLNGMIAISDTSSERSFDGRPLV 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52305099 52307240 + Bma020571.1 Bma04g01639 82008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01639 713 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 26 703 - -
Bma04g01639 713 SMART serkin_6 385 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01639 713 Pfam Legume lectin domain 37 263 IPR001220 GO:0030246
Bma04g01639 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Bma04g01639 713 Pfam Protein kinase domain 388 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01639 713 ProSitePatterns Protein kinases ATP-binding region signature. 391 414 IPR017441 GO:0005524
Bma04g01639 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 275 IPR013320 -
Bma04g01639 713 MobiDBLite consensus disorder prediction 280 311 - -
Bma04g01639 713 Gene3D Transferase(Phosphotransferase) domain 1 461 679 - -
Bma04g01639 713 CDD STKc_IRAK 391 658 - -
Bma04g01639 713 PANTHER - 26 703 - -
Bma04g01639 713 CDD lectin_legume_LecRK_Arcelin_ConA 52 264 IPR001220 GO:0030246
Bma04g01639 713 Gene3D - 34 271 - -
Bma04g01639 713 SUPERFAMILY Protein kinase-like (PK-like) 367 688 IPR011009 -
Bma04g01639 713 ProSiteProfiles Protein kinase domain profile. 385 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01639 713 Gene3D Phosphorylase Kinase; domain 1 348 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01639 Bma-Chr4:52305099 Bma10g00593 Bma-Chr10:7271495 0 dispersed
Bma12g00328 Bma-Chr12:5269475 Bma04g01639 Bma-Chr4:52305099 1.03E-103 dispersed
Bma10g00022 Bma-Chr10:329164 Bma04g01639 Bma-Chr4:52305099 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66484 PF00069 Pkinase 5.90E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01639 - - bhj:120091585 1064.29