Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01643 TGGAGTGATAAGAAGGAAATGGGAGGGAAGGGAAATTGGTTTTCTTCTGTAAAGAAAGCTCTCAGCCCTGAGGCCAAAGAGAAGAAAGATCAGTTGCAATTATTCCAGAATTCCAAATCGAAGAAGAAATGGTTCGGAGCAAGAAGGGCATTGCGGGCTTTAAGAGGATTGGTGAGGCTTAAAACATTGATGGAAGGTTCGGTTGTGAAACGGCAAGCTGCAAATACTCTTCGATGCATGCAAACCCTTTCGCGAGTTCAGTCTCAAATTCGTTTCAGGAGGATCCGGATGCTAGAAGAGAATCAAGCTCTTCAAAAACAACTTCTACAAAAACACGCTAAAGAGCTGGAGAATTTTCGGATGGGGGAGGAATGGGATGACAGCCTGCAGTCAAAGGAGCAAATTGAAGCTAATCTACTAAGCAAATATGAGGCTGCTATGAGAAGAGAGAGAGCATTGGCTTATTCATTCTCCCATCAGCAAACCTGGAAAAATTCTTCAAGATCTGTAAATCCAATGTTTATGGATCCAAGCAATCCCACCTGGGGTTGGAGCTGGTTAGAACGATGGACGGCAGCCCGGCCATGGGAAAGTCGGGAAGAAAAGGAGCAGAATAACGAGAACTCATCTGTAAAGAGCGTAAGGCGTGGCATTTCTCCAGGAGAGATAAGCAAGTCTTATACAAAATACCAACTAAATGCTGAAGCAAACTCCCCGACGGCTAGTGTAAAGGCAAACAATTCAACTTTCGAGTCCCCTTTGACTCCTTCCAAGCCTGCATTGCCTGTATCAACTAGAAAAATGAAGCCCCCCAGCCCCAGAAGTTGCTTGGGTCTAGAAGATGACTCGAAGAGCATAGCTAGTTTGCAGTCAGAACGTGTTCGGAGGCATAGCATGGGTGCGGGATCAGTGAGGGACGATGAGAGCATAGCTAGCTCTTCGGCAGTGCCTAGCTACATGACCCCAACTGAATCTGCAAGAGCCAAATCCAAATCGCAAAGCCCTTTCGCAATGGAGAAGGCCGAAACAGTAGAAAAAGTATCACCAATCCCCACTAAGAAGCGACTTTCATTTACGACTTCTGCCGCCCTACCAAGGCGGCACTCGGGTCCGCCGAAGATCGAAAGCAGCTTCAACGCAGAAGCCCAATTAAGCAATGGTGTAAGTGCATAA 1173 46.63 WSDKKEMGGKGNWFSSVKKALSPEAKEKKDQLQLFQNSKSKKKWFGARRALRALRGLVRLKTLMEGSVVKRQAANTLRCMQTLSRVQSQIRFRRIRMLEENQALQKQLLQKHAKELENFRMGEEWDDSLQSKEQIEANLLSKYEAAMRRERALAYSFSHQQTWKNSSRSVNPMFMDPSNPTWGWSWLERWTAARPWESREEKEQNNENSSVKSVRRGISPGEISKSYTKYQLNAEANSPTASVKANNSTFESPLTPSKPALPVSTRKMKPPSPRSCLGLEDDSKSIASLQSERVRRHSMGAGSVRDDESIASSSAVPSYMTPTESARAKSKSQSPFAMEKAETVEKVSPIPTKKRLSFTTSAALPRRHSGPPKIESSFNAEAQLSNGVSA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52333556 52335703 + Bma020575.1 Bma04g01643 82012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01643 390 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 47 383 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 293 390 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 236 259 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 195 217 - -
Bma04g01643 390 PANTHER IQ-DOMAIN 5-RELATED 47 383 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 307 332 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 195 209 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 236 280 - -
Bma04g01643 390 MobiDBLite consensus disorder prediction 376 390 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01643 Bma-Chr4:52333556 Bma07g01423 Bma-Chr7:50036173 6.08E-37 dispersed
Bma03g00009 Bma-Chr3:154979 Bma04g01643 Bma-Chr4:52333556 6.76E-23 transposed
Bma06g00330 Bma-Chr6:6805939 Bma04g01643 Bma-Chr4:52333556 3.39E-11 transposed
Bma08g00947 Bma-Chr8:48453472 Bma04g01643 Bma-Chr4:52333556 2.43E-118 transposed
Bma08g01144 Bma-Chr8:50511458 Bma04g01643 Bma-Chr4:52333556 7.89E-76 transposed
Bma14g02008 Bma-Chr14:43499126 Bma04g01643 Bma-Chr4:52333556 7.89E-15 transposed
Bma10g00020 Bma-Chr10:311338 Bma04g01643 Bma-Chr4:52333556 9.62E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01643 - - cpap:110826041 442.58