Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01653 ATGGTCAATTTTTGCTGCAAACCTCGTGTCGACGACGAAGGAACTCGTTTTCACGATGATTCGAGTAGGGAAATTGATGGGTTGCTATGGTCTAAGGATTTGGGGTTCCATGATCATGGTCAATTTTCGATGGCAGTGATTCAGGCGAACTCAACGTTGGAGGATCAAAGCCAACTCGAATCAGGGCCGTTGAACTTGACTCCTTCCGATCCACGTGCAACTTTCGTCGGAGTATACGACGGCCACGGTGCAGCAGAGGCATCGCGTTTCGTCAACGATCATCTTTTCTGCAACATCAAGAGATTTGCATCTACTCATCAAGGGATATCCGAAGATGTCATTAGGCAGGCTTTTGCAGCAACAGAAGAAGCTTTTCTCTCCCTCGTGGGGGAAACATGGCTTGTCAAGCCAGAGATGGCCTCATCCGGTTCGTGTTGTCTGGTAGGACTAATCGCCAACGGCTATCTACATATTGCAAACTTGGGAGATTCCCGAGTTGTATTAGGCAGAGCTGAGAAAGGAACTAAAGACATCAAGGCTATCCAGCTATCCACAGATCACAATGCAAGTTTTGAGTCGGTGAGAAAGGAACTACGAGAGGCTCATCCACAAGATCCCAACATTGTTCAGCTTAAACACAGAGTTTGGCGCGTCAAAGGCCTGATCAAACAGGTTTCTCGTTCCATTGGAGATGCATATTTGAAGAAGTCAGAGTTCAATAGAGCGCCGCTGTTGCCGAAGTTTAGACTGACCAAACCATTTCACAAGCCAATTCTTAGCTCTGAGCCTTCAATTTCAGCTCACAAAATCCGTCCGGAAGATCAGTTTCTTATATTTGCTTCTGATGGTTTATGGGACCATCTTAGCAATGAGAGAGCAGTAGACATTGTTTGTAGTTACCCACGTAACGGTATTGCAAGGAGGCTTGTGAAGGCTGCTCTTGAAGAAGCTGCTAAGAAAAGAGAAATAAGATACTCTGACCTGAAATTGATTGAAAGAGGAGTTAGAAGGCATTTTCACGATGATATAACAGTAATTGTTGTGTTTTTAGATGCTCACGCAGTTAATGGATGGTTTCTCGACACTTGGTTTTCCATTAAAGGAGGTGAAGAAGGTCTTCCTGCTCCTGCAAAAATTTCAGACTAG 1146 44.85 MVNFCCKPRVDDEGTRFHDDSSREIDGLLWSKDLGFHDHGQFSMAVIQANSTLEDQSQLESGPLNLTPSDPRATFVGVYDGHGAAEASRFVNDHLFCNIKRFASTHQGISEDVIRQAFAATEEAFLSLVGETWLVKPEMASSGSCCLVGLIANGYLHIANLGDSRVVLGRAEKGTKDIKAIQLSTDHNASFESVRKELREAHPQDPNIVQLKHRVWRVKGLIKQVSRSIGDAYLKKSEFNRAPLLPKFRLTKPFHKPILSSEPSISAHKIRPEDQFLIFASDGLWDHLSNERAVDIVCSYPRNGIARRLVKAALEEAAKKREIRYSDLKLIERGVRRHFHDDITVIVVFLDAHAVNGWFLDTWFSIKGGEEGLPAPAKISD 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52389748 52391252 - Bma020586.1 Bma04g01653 82022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01653 381 Gene3D - 31 356 IPR036457 -
Bma04g01653 381 SMART PP2C_4 31 348 IPR001932 -
Bma04g01653 381 PANTHER ALPHABET, ISOFORM E-RELATED 4 371 - -
Bma04g01653 381 CDD PP2Cc 42 350 IPR001932 -
Bma04g01653 381 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Bma04g01653 381 Pfam Protein phosphatase 2C 63 319 IPR001932 -
Bma04g01653 381 PANTHER PROTEIN PHOSPHATASE 2C 67-RELATED 4 371 - -
Bma04g01653 381 SUPERFAMILY PP2C-like 50 351 IPR036457 -
Bma04g01653 381 ProSiteProfiles PPM-type phosphatase domain profile. 41 350 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01653 Bma-Chr4:52389748 Bma08g00966 Bma-Chr8:48642062 6.47E-173 dispersed
Bma04g01653 Bma-Chr4:52389748 Bma12g00917 Bma-Chr12:40612620 3.52E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01653 K01102 - csv:101210750 509.605