Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01688 ATGGAAAATATTGCGGCCCAGTTGAAGAGGGGGATATCCAGGCAGTTTTCCACCGGTTCGCTTGGCCGCAACCTGAGCCGGCAGTTTACGCGCCAGTCATCGCTTGACCCGAGGCGGAAAAATGTCAGATTTAGCTTCGGAAGGCAGTCTTCGCTGGACCCCATCCGGCGCAGCCCTAGTCGCGAGAACGATCTATCCGTGCCTGAGAACCTTGACTCAACCATGAACCTTCTTTTCTTGGCGTGTCGGGGGGACGTCAAGGGAGTCAATGATTTGCTCGATGACGGGGTCGATGTCAATAGCATCGACTTAGATGGCCGAACTGCGTTGCATATCGCCGCATGCGAAGGCCACGTTGAGGTTGTCAAGCTCTTGCTCAGCCGAAGGGCCAATATGGATGCTCGTGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAACACTATGGGCAGACAGAGGTTTTCAACATTTTGAAGGCTCGCGGAGCAAAAGTTCCTAAAAACAGGAGGACGCCAATGACGGTTGCAAATCCCCGTGAAGTTCCAGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGGGAGATGGAATCTCCAAGGGCACGTATCAAGTAGCTAAATGGAATGGAACGAAGGTTGCAGTAAAAATACTTGATAAAGAGAGCTACTCAAACCCTGATACTATAATTGCTTTCAGACATGAGTTAGCTCTATTAGAAAAGGTCCGCCATCCTAACGTAGTACAATTTGTTGGAGCAGTTACCCAGAATGTTCCAATGATGATTGTGTCAGAGTATCATTCGAAGGGAGACTTGGCTGGCTATATTCAAAAGAAAGGGCGCTTGTCTCCATCTAAAGCTCTCAGATTTGCTCTTGATATTGCTAGGCATGTCTTGGGAATGAACTATCTTCATGAAGTTAAGCCAGACCCCATTATCCACTGTGATCTAAAGCCAAAAAATATTTTGCTCGACGTTGGAGGTCAATTGAAGGTAGCTGGATTTGGTTTGATAAGGTTATCAAAAATTTCACCGGACAAAGCAAAACTAGCACTCCCTGAGGCTAACATTGACCTTTCAAGCATATATTTGGCGCCTGAGGTTTACAAGAATGAAATATTTGACAGAAGTGTGGACTCGTTTTCTTTTGGTCTAATTGTATATGAGATGATTGAGGGCATACAACCTTTCCATCCTAAACCTCCCGAAGAGGCTGCAAAAATCATCTGTTTGGAAGGACAAAGACCTCAATTCAAGATCAAATTGAAAAATTATCCACCGGATTTGATAGAGTTAATTGAGGAATGCTGGGATCCAGAACCTGTTGTAAGGCCAACTTTTTCTGAGATTATTGTTCGTTTGGATAAAATAGTGTCCAACTGCTCAAAACAAGGATGGTGGAAGGACACTTTTAAGCTTCCGTGGTATGTCTTCTGA 1440 45.56 MENIAAQLKRGISRQFSTGSLGRNLSRQFTRQSSLDPRRKNVRFSFGRQSSLDPIRRSPSRENDLSVPENLDSTMNLLFLACRGDVKGVNDLLDDGVDVNSIDLDGRTALHIAACEGHVEVVKLLLSRRANMDARDRWGSTAAADAKHYGQTEVFNILKARGAKVPKNRRTPMTVANPREVPEYELNPLELQIRRGDGISKGTYQVAKWNGTKVAVKILDKESYSNPDTIIAFRHELALLEKVRHPNVVQFVGAVTQNVPMMIVSEYHSKGDLAGYIQKKGRLSPSKALRFALDIARHVLGMNYLHEVKPDPIIHCDLKPKNILLDVGGQLKVAGFGLIRLSKISPDKAKLALPEANIDLSSIYLAPEVYKNEIFDRSVDSFSFGLIVYEMIEGIQPFHPKPPEEAAKIICLEGQRPQFKIKLKNYPPDLIELIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPWYVF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 53102334 53114412 + Bma020624.1 Bma04g01688 82057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01688 479 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 475 - -
Bma04g01688 479 SUPERFAMILY Protein kinase-like (PK-like) 199 455 IPR011009 -
Bma04g01688 479 SUPERFAMILY Ankyrin repeat 75 167 IPR036770 -
Bma04g01688 479 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
Bma04g01688 479 SMART serkin_6 193 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01688 479 CDD STKc_MAP3K-like 199 455 - -
Bma04g01688 479 Gene3D Transferase(Phosphotransferase) domain 1 270 471 - -
Bma04g01688 479 ProSiteProfiles Protein kinase domain profile. 189 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01688 479 Gene3D Phosphorylase Kinase; domain 1 184 269 - -
Bma04g01688 479 Gene3D - 38 183 IPR036770 -
Bma04g01688 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Bma04g01688 479 PIRSF ILK 8 476 - -
Bma04g01688 479 Pfam Protein tyrosine and serine/threonine kinase 199 454 IPR001245 GO:0004672|GO:0006468
Bma04g01688 479 PRINTS Tyrosine kinase catalytic domain signature 265 278 IPR001245 GO:0004672|GO:0006468
Bma04g01688 479 PRINTS Tyrosine kinase catalytic domain signature 307 325 IPR001245 GO:0004672|GO:0006468
Bma04g01688 479 PRINTS Tyrosine kinase catalytic domain signature 426 448 IPR001245 GO:0004672|GO:0006468
Bma04g01688 479 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Bma04g01688 479 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 475 - -
Bma04g01688 479 SMART ANK_2a 105 134 IPR002110 GO:0005515
Bma04g01688 479 SMART ANK_2a 138 167 IPR002110 GO:0005515
Bma04g01688 479 SMART ANK_2a 73 101 IPR002110 GO:0005515
Bma04g01688 479 Pfam Ankyrin repeats (3 copies) 78 165 IPR002110 GO:0005515
Bma04g01688 479 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01451 Bma-Chr3:41255879 Bma04g01688 Bma-Chr4:53102334 0 dispersed
Bma04g01688 Bma-Chr4:53102334 Bma14g01847 Bma-Chr14:39510068 3.29E-135 dispersed
Bma04g01688 Bma-Chr4:53102334 Bma04g00428 Bma-Chr4:3515283 3.69E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66485 PF07714 PK_Tyr_Ser-Thr 3.40E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01688 - - twl:120005582 808.52