Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma04g01702 ATGATGGTGAGCTCGATCTCATTTGTGGATGTTTGGGGATTTCTAGTCCCGATGATTTCGCGATCCCCGCTGCTGAATGGGAAGCCTTACGGTCAGACTACTCCTCTCGTGCCCGGCTCAAAGCATCAGAACGGCGATGATTTAGAGCTTCGCCGATTGTATCGGAAGGCAAAAAATGATTTTCCATCTCAATTTGATGTCAATTCGAACGTAGTTGGTGGGGTTGAAAATGGACGGAGAGTTGGCGACGAGGATGCCAAATTCCATTCCATCTTGTCAAACAATAACAAAGCTATGGATGACCGAGGAGAATGCATTTACGTTGTACGGACTCCTGTTCTTTCTCCTTCTCCGGGAAAATTGCGTTCAGTTGTTGATGACGTTAACTCCACTTGGGAAATTTGCAGATCTTTTTCTCCCAATGATGACAAATACCCAGCTTGTAATTTAAGTCAAGCTGACGAAAGCAAGGCCAGATTTGAGGACGGTGAGAGATACGATGGAGGAGTTTGTGGAAGTGGATTGTTTGGTCCCTTGCATTCGGCGAACACAACAAATGGTTACAGTGATGAGTTGAGCTTAGGGGATCCAACAAATGTTAATGATAATGGGGCTGTTTCAGAAGCGGTGCATTATTTTACCCCCAATGGGAAATTCAAACGCAAAAATTCTTCATCATGGCAAAAATGTGATCATTTGGGAAGTGGATCTTTCGGAAGCGTATTTGAGGCAATCACTGACGATGGCTTCTTTTTTGCTGTAAAGGAGGTTTCCTTGCAAACTCAAGGAAGTGATGGAAGCGAGAGCATTCTTCAATTAGAGCAGGAGATTTCTCTTTTAAGTCAGTTCAAACATGAGAACATAGTTCGGTATCTCGGAACAGACAAGGACAGAAATAAATTATATATCTTCCTTGAGCTCCTTCCAAAAGGCTCATTAGCAAAGCTGTATCAAAGGTTGCGCTTGAAGAAGTCTCAAGTTTCAGCATATACGAGGCAGATTTTGCACGGGTTAAATTATCTTCATAAACAGAATATAGTTCACAGAGATATCAAATGTGCTAATATTTTGGTCGACGGAAGTGGATCAGTGAAGCTTGCAGATTTTGGGCTGGCAAAGGCAATCAAATTTAATGATGCTAATTCATTTAAAGGAACTGCATACTGGATGGCTCCTGAGGTTGTAGATCTCCAGACTCTTGGCTATGGGCTTCCAGCTGATATTTGGAGTCTTGGATGTACAGTGTTAGAGATGTTAACGGGTCGACATCCGTATTCTCAGTTAAATGCCGTGCAAGCATTATATAAGATTGGGAATAAGGAACTCCCTCCACTTCCTCATTCGTTGTCTGGCGATGCCCGGGATTTCATCCTTAGTTGCTTGCAAGTCGACCCACATAGCCGGCCTAATGCGTCTGAACTTTTAAGTCATCCATTTGTCAGGATGCCGATTTGA 1455 43.16 MMVSSISFVDVWGFLVPMISRSPLLNGKPYGQTTPLVPGSKHQNGDDLELRRLYRKAKNDFPSQFDVNSNVVGGVENGRRVGDEDAKFHSILSNNNKAMDDRGECIYVVRTPVLSPSPGKLRSVVDDVNSTWEICRSFSPNDDKYPACNLSQADESKARFEDGERYDGGVCGSGLFGPLHSANTTNGYSDELSLGDPTNVNDNGAVSEAVHYFTPNGKFKRKNSSSWQKCDHLGSGSFGSVFEAITDDGFFFAVKEVSLQTQGSDGSESILQLEQEISLLSQFKHENIVRYLGTDKDRNKLYIFLELLPKGSLAKLYQRLRLKKSQVSAYTRQILHGLNYLHKQNIVHRDIKCANILVDGSGSVKLADFGLAKAIKFNDANSFKGTAYWMAPEVVDLQTLGYGLPADIWSLGCTVLEMLTGRHPYSQLNAVQALYKIGNKELPPLPHSLSGDARDFILSCLQVDPHSRPNASELLSHPFVRMPI 484
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 53259009 53262775 - Bma020637.1 Bma04g01702 82071
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma04g01702 484 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Bma04g01702 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Bma04g01702 484 PANTHER BNAA02G34600D PROTEIN 103 482 - -
Bma04g01702 484 Gene3D Transferase(Phosphotransferase) domain 1 223 484 - -
Bma04g01702 484 ProSiteProfiles Protein kinase domain profile. 227 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01702 484 Pfam Protein kinase domain 228 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01702 484 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 103 482 - -
Bma04g01702 484 SMART serkin_6 227 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma04g01702 484 SUPERFAMILY Protein kinase-like (PK-like) 208 481 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02638 Bma-Chr1:83891178 Bma04g01702 Bma-Chr4:53259009 8.80E-124 dispersed
Bma02g00241 Bma-Chr2:2518061 Bma04g01702 Bma-Chr4:53259009 1.28E-123 dispersed
Bma04g01702 Bma-Chr4:53259009 Bma15g00785 Bma-Chr15:16763102 3.44E-75 dispersed
Bma05g01388 Bma-Chr5:53297476 Bma04g01702 Bma-Chr4:53259009 3.76E-24 dispersed
Bma04g01702 Bma-Chr4:53259009 Bma01g00841 Bma-Chr1:7951419 7.08E-128 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66486 PF00069 Pkinase 2.90E-69 CL0016 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma04g01702 K13414 - egr:104452740 422.55