Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00044 ATGGAATCTCTCTGCAATTTCATCGAAATCCCATCGAAATCCTCTCCTCCTTCCTTCAGATTCCCCTTTTTGCCTAGCCAAACCAAGCTTTGTCCCTCTCAGTTTCCCTACAGTAGTGAGATCATCAATTTTCGTACCGGAGTTGCCATTATCTCAAAACCCTCTGCGCTATCCATTACCGCTGTTACGAAAAGGGTAGGTCGAATAAGGGCTGTCACCGCCGGAAATGGGTCGCTGGCGGCGTTGTCTGAGATCGACATGGTGGAAAACAAACAAGGGATTTTCACACCCAAGCAGAACAAGGTCGTTGTCCTCTGGGACCTCGACAACAAGCCGCCTCGTGGACCGCCGTACGAGGCGGCGATGGCTCTCCGACGAGTAGCAAATCGTTTTGGCGACGTGATCGATTTCTCTGCCTACGCTAACCGCCACGCCTTCGTCCATTTACCCCAGTGGGTGCTCGAAGAACGGCGAGAACGGAAGCGATTAGACATTCTGGAGCGAAAGAGTTTGTCTATGCCTTCCGATTTGTACGTATGTGGCGTTTGTGGCCGGAAGTGCAAAACCAATCTCGATCTGAAGAAGCATTTCAAACAACTCCACGAGCGAGAGCGGGAGAAGAAACTGAGCAGGATGAGATCTTTGAAAGGCAAAAAGCGTCAGCGTTATAAAGAGAAACACATATCTGGAAATGAGAAGTACATTGCGGCTGCGAGGTCATTAATAACTCCGAAGGTGGGATATGGGTTGGCTTCTGAATTGCGACGAGCTGGGGTTTTTGTGAAGACGGTGGAGGACAAACCTCAGGCGGCGGATTGGGTGCTGAAGAGGCAAATGCAGCATTCCATGAGCAGAGGCATTGACTGGCTGTTTCTGGTCTCAGACGATTCTGACTTTTCGGAGATGTTGAGGAGGGCCAGGGACGCCAATTTGAGAACAGTGGTGGTCGGCGATCGGGACAGAGCTTTGGGGAGACACGCCGATTTGTGGGTACCTTGGACTGGCGTCGAAAATGGGGAAATTTCAGAGGAAGATTTGGAGCTCAAAAGCCGCCGGAGAAGCGAAGAATATGACGAAATCGATGAAGTGCAGACCGATCATGGATTGGATAGCATCGTGGATGAGCTTGTCAGTGTAAGAAAGGAGTTAAACGGGTTGAGAATTTCTTCATTTTCAGAAGGGGAAGAGGAAGATGACTATTTGTTGAGTTACAGTGAGGACGAGGAAGAAGACGATGACTACTACTGA 1248 49.76 MESLCNFIEIPSKSSPPSFRFPFLPSQTKLCPSQFPYSSEIINFRTGVAIISKPSALSITAVTKRVGRIRAVTAGNGSLAALSEIDMVENKQGIFTPKQNKVVVLWDLDNKPPRGPPYEAAMALRRVANRFGDVIDFSAYANRHAFVHLPQWVLEERRERKRLDILERKSLSMPSDLYVCGVCGRKCKTNLDLKKHFKQLHEREREKKLSRMRSLKGKKRQRYKEKHISGNEKYIAAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWVLKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRARDANLRTVVVGDRDRALGRHADLWVPWTGVENGEISEEDLELKSRRRSEEYDEIDEVQTDHGLDSIVDELVSVRKELNGLRISSFSEGEEEDDYLLSYSEDEEEDDDYY 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2250174 2251421 - Bma020732.1 Bma05g00044 82128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00044 415 PANTHER OS06G0166200 PROTEIN 61 395 - -
Bma05g00044 415 PANTHER - 61 395 - -
Bma05g00044 415 MobiDBLite consensus disorder prediction 395 415 - -
Bma05g00044 415 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 206 IPR013087 -
Bma05g00044 415 CDD PIN_LabA-like 188 318 - -
Bma05g00044 415 MobiDBLite consensus disorder prediction 393 415 - -
Bma05g00044 415 ProSitePatterns Zinc finger C2H2 type domain signature. 180 201 IPR013087 -
Bma05g00044 415 Gene3D - 96 334 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57283 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00044 - - csv:101206044 525.013