Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00078 ATGGAGAGTAATGATGAAGAGGGTGAAGAGTTCGGATTCTCTAGGAACTATTTTTTGGCAAAAGAACTGGGGGGCTCATCTAAGAAATCAACTCGGACGCTCTCTGACATTGATATCATCGATGAACAGCAGGAACTGAGAGATGAAGCGGTCAATATAAAACCTAAGCACGAGAAAGAAATTCTAGCATTAATGAGTGGCTACAAAAGTTTGTACTCCCAGTGGGTTTTCATGCTAAGGCAAGTAAAATATTCTTCCTATTCTATGTGTGGTTTTGGCCTTTTGATGTATGGATTTGGATCTAAGAAAGCGTTGATTGAAGATTTTGCTTCAAATGCTTTAAGTGAATATTCTGTTATTGTAGTCAATGGTTATCTTCAATCTGTTAATATTAAACAGGTTTTAGTAGCGTTGGCCGAAGTTCTGTGGGATCAATTGAAAATCAGACGAACAGGCAATTTGCCTAAAGGCCAACAACCGTTTAATTCCCGATCGGTGGATGACCTTATTTCCTTTTTGGATGGACCAAAGTTGGAGGAAAATGACCCTTTTATATGTGTTGTTATTCATAACATTGATGGTCCAGGATTAAGAGATTCTGACGTGCAACAATATTTGGGTCGACTCGCTGCTTGCTCCCACATTCGTATGATTGCCTCTATTGACCATATTAATGCACCACTATTGTGGGACAAGAAGATGGTTCACACCCAATTTAACTGGTGTTGGTATCATGTTCCTACCTTTGCACCATATACAGTCGAAGGCACGTTTTTTCCATTGATTCTTGCGCAGGGAAGTTCAGGCCAAAGTGCAAAAACTGCAACAATCGTTTTGCAGAGTTTGACGCCCAATGCTCAAAGCGTTTTCAAAGTTCTGGTTAAACATCAACTCTCTCATCCTGATGAAGAAGGAATGCCAATGAGCGAGTTGTATGCGGTTTGTCGAGAGTTGTTCTTGGTGAGTAGTCAGGTTACGCTGAACTCCCACTTGACCGAGTTTAAAGACCATGAGTTGGTGAAGAGTAGAAGGCATGCCGATGGGCAGGATTGCTTGTTCATTCCCCTCTCATCAGAAGCACTTGAAAAGCTATTGGTGGAGATCAGA 1107 41.28 MESNDEEGEEFGFSRNYFLAKELGGSSKKSTRTLSDIDIIDEQQELRDEAVNIKPKHEKEILALMSGYKSLYSQWVFMLRQVKYSSYSMCGFGLLMYGFGSKKALIEDFASNALSEYSVIVVNGYLQSVNIKQVLVALAEVLWDQLKIRRTGNLPKGQQPFNSRSVDDLISFLDGPKLEENDPFICVVIHNIDGPGLRDSDVQQYLGRLAACSHIRMIASIDHINAPLLWDKKMVHTQFNWCWYHVPTFAPYTVEGTFFPLILAQGSSGQSAKTATIVLQSLTPNAQSVFKVLVKHQLSHPDEEGMPMSELYAVCRELFLVSSQVTLNSHLTEFKDHELVKSRRHADGQDCLFIPLSSEALEKLLVEIR 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2646503 2649193 - Bma031166 Bma05g00078 82162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00078 369 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 15 367 IPR007220 GO:0000808|GO:0005634|GO:0006260
Bma05g00078 369 Pfam Origin recognition complex subunit 2 30 359 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00061 Bma-Chr5:2482409 Bma05g00078 Bma-Chr5:2646503 0 dispersed
Bma05g00078 Bma-Chr5:2646503 Bma11g00406 Bma-Chr11:4375739 2.97E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00078 K02604 - qsu:112017535 568.54