Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00124 ATGGATGTTGGTGAGCTAAACAAAGAAACGAGAACACCAGGCGGGTCGCTCTCTTCCATATTTGCCCACCTCATCGGAGAATCTTCCGCCGGAGATGACGCCAGAAGATTATCAGAAGCAACTCACAATTGCGTTAATTTTCCTCATCTTCTTCGCCAAGAATCACCCGGCCAACAACGAGGCATTGTTTCCGAACGACTAACTTTACCAGAAGAGAATATTGCTTCGTGTCATGGTAGATCTAAACCGAGAAACTCACCTGCTGGTGTCGTTAGATATGGGGATTGTCTAAAGAACCACGCGGCGAACACCGGCGGTAACATTTACGACGGCTGTGGGGAGTTCATACCGAAAGGAGAAAACGGAACCCTAGAAGCTTTGAAATGCGCTGCTTGCGAGTGCCACAGAAATTTCCACCGGAAAGAAGTAGACGGCGAGCGCCAATTGATGAGTCCAAGCTCGAGAAGAACCATAGTCCTCAATCACCTGCAGCTTCCGCCGCCATTTTCGTCGCCCCACCACCATAAATTCTCAATAGGCGGCCTGAATTTCCACTCAAGCCCTACCGCTCCTATCGTCACGCCTATGAACGTCGCTTTCGGCGCAAACGAGTCATCAAGCGAAGATCTAAACGTGTTTCAGTCCAACGCAGAAGCAAATACATACCCGCCATTTTTTCCCTCAAAGAAAAGGTTCAGAACGAAGTTCACTCAAGAACAGAAGAACAAAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAGACGAACAAGAAGTAGACAAGTTCTGCGCTGAAGTTGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAACAACAAGACGAGCACCATTAAAAAGCAAAACGAGAATCATGATCCAATCTTGGACATAACTGGAGCAGATGATGAAATGATTGACTCGGAAAAGTTAGAACAGAGAAGCAGATAA 963 46.73 MDVGELNKETRTPGGSLSSIFAHLIGESSAGDDARRLSEATHNCVNFPHLLRQESPGQQRGIVSERLTLPEENIASCHGRSKPRNSPAGVVRYGDCLKNHAANTGGNIYDGCGEFIPKGENGTLEALKCAACECHRNFHRKEVDGERQLMSPSSRRTIVLNHLQLPPPFSSPHHHKFSIGGLNFHSSPTAPIVTPMNVAFGANESSSEDLNVFQSNAEANTYPPFFPSKKRFRTKFTQEQKNKMLEFAEKVGWRMQKQDEQEVDKFCAEVGVKRQVLKVWMHNNKTSTIKKQNENHDPILDITGADDEMIDSEKLEQRSR 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3902942 3903904 + Bma020827.1 Bma05g00124 82208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00124 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 61 292 - -
Bma05g00124 320 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 229 285 IPR006455 -
Bma05g00124 320 Pfam ZF-HD protein dimerisation region 91 143 IPR006456 -
Bma05g00124 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 61 292 - -
Bma05g00124 320 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 93 142 IPR006456 -
Bma05g00124 320 SUPERFAMILY Homeodomain-like 221 287 IPR009057 -
Bma05g00124 320 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 92 143 IPR006456 -
Bma05g00124 320 MobiDBLite consensus disorder prediction 292 320 - -
Bma05g00124 320 Gene3D - 216 289 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00760 Bma05g00124 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00888 Bma-Chr1:8344246 Bma05g00124 Bma-Chr5:3902942 1.69E-42 dispersed
Bma02g00294 Bma-Chr2:3402281 Bma05g00124 Bma-Chr5:3902942 3.69E-14 dispersed
Bma02g00312 Bma-Chr2:3747896 Bma05g00124 Bma-Chr5:3902942 1.78E-43 dispersed
Bma03g00988 Bma-Chr3:10644405 Bma05g00124 Bma-Chr5:3902942 5.07E-61 dispersed
Bma05g00124 Bma-Chr5:3902942 Bma09g00128 Bma-Chr9:3877661 4.08E-49 dispersed
Bma14g01426 Bma-Chr14:27153876 Bma05g00124 Bma-Chr5:3902942 3.95E-43 dispersed
Bma12g00035 Bma-Chr12:912067 Bma05g00124 Bma-Chr5:3902942 9.69E-57 transposed
Bma01g00760 Bma-Chr1:6996925 Bma05g00124 Bma-Chr5:3902942 1.29E-129 wgd
Bma05g00124 Bma-Chr5:3902942 Bma06g00120 Bma-Chr6:1632572 4.83E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57295 PF04770 ZF-HD_dimer 7.00E-28 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00124 - - csv:101216040 333.954