Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00136 ATGGATATCTTCAAAGTTCTTCTGGGTTTTATTGTGCTGACATTTTTGTCCTCCACACTCTCCCAAGCCTTCCCAGGCTTTGATTTTGGTTTTGGGTGGGGTGGTAGTGGTAATATAGGCAATGGCGGAGGTTATAATGGTCTGTTTCCTCAATACTATCAGTTCTCATGCCCCCAAGTGAATGACATTGTCATGTCTGTTTTGGAGAAGGCAATTGCACAGGAGCCTAGAATGGCTGCCTCTTTACTCAGACTTCACTTTCACGACTGCTTTGCTCTGGGCTGTGATGCGTCTGTACTGCTGGATAATAGCGCCATTATTAACAGTGAGAAGAATTCTTTGCCAAACAGAAACTCCATTAGAGGGTTTCAAGTGGTGGACGAGATCAAGGCTAGACTGGAAGAGGAATGCCCTCAGATAGTTTCCTGTGCTGACATTCTAGCACTGGCTGCCCGTGGCTCTACGCTTCTGAGCGGAGGGCCATCTTGGGAGCTTCCACTCGGCAGAAAGGACTCAAAAACAGCAAGTGTTAGCCTCTCAAACAACAATATTCCAGCCCCAAATTCCACCGTTCAGAACCTCGCAAACTTGTTCAAACGTCAAGGCCTCGATGAAGTAGACCTCGTTGCTCTTTCAGGTGGACATACAATTGGGGTGGCGAGGTGCGTGACGTTCAAGCAGAGACTGTACAATCAAAATGGAAACAACGAACCAGACGAGACGCTTGAAAGAAGCTACTACTTTGAACTGAAATCAATCTGCCCAAGAACTGGCGGAGACAACAACATTTCTCCGCTGGACATTGCCTCTCCTGTCAGATTCGACAACACCTATTTCAAGCTCATACTGTGGGGAAAAGGGCTTCTCAATTCAGACCAAGTCCTCTTCACAGGAAATGATGCCAAGACGACGGAGCTGGTCAAGGTTTATGCAGAGAACGAGAGCTTGTTCTTCGAGCAGTTTGCTAAATCTATGGTGAAGATGGGAAATATAAGCCCTCTGATAGGGTTTAATGGAGAAGTCAGGAAGAACTGTCGCAGGGTTAACTGA 1050 46.76 MDIFKVLLGFIVLTFLSSTLSQAFPGFDFGFGWGGSGNIGNGGGYNGLFPQYYQFSCPQVNDIVMSVLEKAIAQEPRMAASLLRLHFHDCFALGCDASVLLDNSAIINSEKNSLPNRNSIRGFQVVDEIKARLEEECPQIVSCADILALAARGSTLLSGGPSWELPLGRKDSKTASVSLSNNNIPAPNSTVQNLANLFKRQGLDEVDLVALSGGHTIGVARCVTFKQRLYNQNGNNEPDETLERSYYFELKSICPRTGGDNNISPLDIASPVRFDNTYFKLILWGKGLLNSDQVLFTGNDAKTTELVKVYAENESLFFEQFAKSMVKMGNISPLIGFNGEVRKNCRRVN 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4177287 4178657 + Bma020844.1 Bma05g00136 82220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00136 349 Gene3D Peroxidase, domain 2 185 328 - -
Bma05g00136 349 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 SUPERFAMILY Heme-dependent peroxidases 48 349 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 Gene3D - 52 349 - -
Bma05g00136 349 ProSiteProfiles Plant heme peroxidase family profile. 47 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
Bma05g00136 349 CDD secretory_peroxidase 48 348 IPR033905 GO:0004601|GO:0042744
Bma05g00136 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Bma05g00136 349 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 Pfam Peroxidase 66 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00136 349 PANTHER PEROXIDASE 9 48 348 - -
Bma05g00136 349 PANTHER PEROXIDASE 72-RELATED 48 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00136 Bma-Chr5:4177287 Bma09g00092 Bma-Chr9:2440209 6.27E-145 dispersed
Bma06g00295 Bma-Chr6:4274616 Bma05g00136 Bma-Chr5:4177287 1.38E-95 dispersed
Bma05g00136 Bma-Chr5:4177287 Bma08g01042 Bma-Chr8:49536459 2.14E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00136 K00430 - tcc:18591452 537.339