Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00144 ATGGTAGAGAGATGGGAAAACGGTGGTTTCTGGGTTATTGCAATCTTTGTGGGGTTTATTCTGAGTGTTGCAGAGGTTGGCCATGGAGGAGTGACGAGTGATTTTGTTAGAACAGCCAACTTGTCTCTGGATATGCCTCTTGACAGTGATGTGTTCAGGATTCCACCCGGCTATAACGCTCCTCAACAGGTTCATATAACGCAAGGAGATTTTGAAGGGAAGGGCGTGATTGTCTCTTGGATTACCCCAGATGAACCGGGTTCAAGCTCAGTCATTTACTGGTCTGAAAATAGTGAGCTCAAAAGCCAAGCTAATGGCTTCTATGTTACTTACAAATACTACAATTATACATCTGGTTATATTCATCACTGCACCATAGAAGATTTGGAGTTTGATACCAAATACTTCTATGAGGTTGGGTTTGGCAATTCCACCAGGAGATTTTGGTTTAAGACTCCTCCTCAAGTTGGTCCTGATGTTCCATACACTTTTGGCCTCATAGGAGACCTTGGACAAACACACGATTCGAATAGGACGCTTACCCATTATGAATTAAGCCCAGCAAAGGGACAAACTGTGTTGTTCGTCGGCGACCTTTCTTATGCGGATGATTATCCATTTCATGATAACACGAGGTGGGACACATGGGGAAGATTCATTGAAAGAAATGCAGCCTATCAACCATGGATTTGGACTGCTGGAAATCATGAACTTGATTTTGCTCCACAACTTGGGGAAATTGTTCCGTTTAAGCCTTATTCGCATCGTTATCATGTCCCATACAAGGCATCAGACAGCACCGCTCCATTTTGGTTCTCCATTAAAAGAGCTTCAGCTTATATAATTGTCATGTCTTCATACTCTGCATATGGAAAGTACACTCCTCAATACAGATGGTTGGAAGATGAGCTGCCTAAAGTAAACAGAACTGAAACCCCATGGCTCATAGTACTTATGCATTCTCCATTGTACAATAGTTATGTTCATCATTATATGGAAGGAGAAACCATGAGAGTGATGTATGAATCATGGTTTGTTAAACATAAAGTCGATGTTATCTTCGCTGGTCATGTCCATGCTTACGAACGATCTGAACGAATATCAAATATTGCATACAATATTGTAAATGGGTTATGCACTCCCATACCAGATGAATCTGCCCCTGTTTACATAACCATTGGCGATGGAGGAAATCTTGAAGGATTGGCAACTCAGATGACAGAGCCACAGCCAGACTACTCTGCTTTTCGAGAAGCCAGCTTTGGTCATGGAATATTGGAAATAAAGAACAGGACTCATGCTTATTTTGGTTGGAACAGAAATGAAGATGGGTATGCCGTAGAGGCTGATTCCGTGTGGTTAAAGAACAGATACTGGAATCCTTCTCTAAAACAACAATCTTTGGCTGTATTTTGA 1416 41.67 MVERWENGGFWVIAIFVGFILSVAEVGHGGVTSDFVRTANLSLDMPLDSDVFRIPPGYNAPQQVHITQGDFEGKGVIVSWITPDEPGSSSVIYWSENSELKSQANGFYVTYKYYNYTSGYIHHCTIEDLEFDTKYFYEVGFGNSTRRFWFKTPPQVGPDVPYTFGLIGDLGQTHDSNRTLTHYELSPAKGQTVLFVGDLSYADDYPFHDNTRWDTWGRFIERNAAYQPWIWTAGNHELDFAPQLGEIVPFKPYSHRYHVPYKASDSTAPFWFSIKRASAYIIVMSSYSAYGKYTPQYRWLEDELPKVNRTETPWLIVLMHSPLYNSYVHHYMEGETMRVMYESWFVKHKVDVIFAGHVHAYERSERISNIAYNIVNGLCTPIPDESAPVYITIGDGGNLEGLATQMTEPQPDYSAFREASFGHGILEIKNRTHAYFGWNRNEDGYAVEADSVWLKNRYWNPSLKQQSLAVF 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4316852 4319264 - Bma020854.1 Bma05g00144 82228

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00144 471 Pfam Calcineurin-like phosphoesterase 163 361 IPR004843 GO:0016787
Bma05g00144 471 PANTHER ACID PHOSPHATASE RELATED 13 466 IPR039331 GO:0003993
Bma05g00144 471 SUPERFAMILY Metallo-dependent phosphatases 158 463 IPR029052 -
Bma05g00144 471 CDD MPP_PAPs 158 456 IPR041792 -
Bma05g00144 471 Pfam Iron/zinc purple acid phosphatase-like protein C 387 446 IPR025733 -
Bma05g00144 471 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 13 466 - -
Bma05g00144 471 Pfam Purple acid Phosphatase, N-terminal domain 61 152 IPR015914 GO:0003993|GO:0046872
Bma05g00144 471 Gene3D - 60 156 - -
Bma05g00144 471 SUPERFAMILY Purple acid phosphatase, N-terminal domain 41 154 IPR008963 GO:0003993|GO:0046872
Bma05g00144 471 Gene3D - 157 466 IPR029052 -
Bma05g00144 471 ProSiteProfiles Fibronectin type-III domain profile. 60 155 IPR003961 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00144 K22390 ACP7; acid phosphatase type 7 - pop:7477642 829.706
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00144 Bma-Chr5:4316852 Bma15g00974 Bma-Chr15:37826280 2.35E-92 dispersed
Bma09g00550 Bma-Chr9:42459523 Bma05g00144 Bma-Chr5:4316852 1.16E-70 transposed
Bma03g00564 Bma-Chr3:4682231 Bma05g00144 Bma-Chr5:4316852 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1026 . . . . . . . . . . . . . . Sed04g3913 . . Bhi04g00213 Tan02g0773 Cmetu01g2623 . Hepe02g0485 . . Cla08g01452 Cam08g1937 Cec08g1511 Cco08g1650 Clacu08g1627 . Cre08g1413 . . . . . . . . Blo17g00768 . . . . . . Bma05g00144 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97