Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00148 ATGGATCTGCTGCGATCGGAGCCGATGCAGTTGGTGCAACTTATAATTCCCATTGAATCAGCGTACCTGACGATCGCTTACCTTGGCGACCTCGGTCTCTTTCAGTTCAAAGATCTCAATACAAGCAAAAGCCCATTCCAGAGGACATATGCGGCGCAGGTGTGTCATAATTTTTTTGAGTTTCCACCTTCTCCTTTTTTTCTTCATGTGGTAGTTGTATGTTCATATTTCTTTACCAAGCAGATCAAAAGATGTGGAGAAATGGCTCGCAAACTCCGTTTCTTCAAAGAGCGAATGATGAAGGCTGGTTTAATGCTCTCACAAAAGTCTACGAAAGGCATGGATATTGATCTGGATAACTTGGAGGTGAAACTCGGAGAATTTGAATCTGAGTTGCTGGAGATAAATTTGAACAATGAAAAGTTACAGAAAAGTTATAGTGAGCTGTTAGAATATAAACTTGTTCTTCAAAAGGCTGGAGAATTTTTTGATTCAGCTCAAAATATTGCTGCAAGTCAGAATAGAGAATTTTCAGTGCAATACAATGGTGAAGGATCAATTGACAGCCCACTTTTATTGGAACAAGAGTTTATGACAGATTCGACTAAGCATGTTAAGCTTGGATTTATAAGTGGGCTAGTTCAAAGGAAAAAGTCATTGGCTTTTGAAAGAATTTTGTTTCGAGCAACCAGGGGTAATGTGTTTTTGCGGCAATCTATGATTGAAGACCCTATAACTGATCCTGGATCAGGAGAGAAGGTTGAGAAAAATGTATTTGTCATCTTCTACTCTGGAGAAATACCAAGGAACAAAATTTTAAAAATATGCGAAGCTTTTGGGGCAAACCTCTACGCATTTCCTGATGATTTAAGCAGACAACCGCTGATGGTCATTGAGGTGTCTAAAAAAATTTCTGAGCTGAAGAGAACAATCGACGTTGGGCTTCTCCATCAGAGAAATTTGCTCCAGACGATTGACTACCAATATGAACAGTGGCATCTTTTGGTGAAAAAAGAAAAGGCCATTTTCCATGCTTTAAATATGCTCAGCATTGATGTCACGAGAAAATGCCTAGTGGCAGAGGGTTGGTGTCCAGTTTTTGCAACAAATCAGATTCAGAAAGCAATTCAACGGGCAACTTTTGACAGCAATTCACAGGTTGGAGCCATATTCCAGGTTTTGCAGTCAAAAGAAATGCCCCCTACATATTTTCAGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTTGATGCATATGGGGTTGCAAGGTATCAGGAAGTAAATCCTGGAGTCTTCACAGTCATCACGTTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGACATGGTATATGCTTGTTGCTATCGACACTGTATTTTATATCCAGAGAGAAGAAATTTTCCAGTCAGAAACTTGGAGATATCATAGAAATGACCTTTGGAGGTCGTTATGTTATCATGATGATGGCACTATTTTCAATATACACAGGACTAGTATACAATGAATTTTTTTCTGTTCCATTTGAACTATTTGGTCCCTCGGCTTATGGATGTCGTGACCCATCCTGCAGAGACGTGACGACAGTGGGTTTGATAAAGATGCACGACACTTACCCATTTGGTTTGGACCCTAAGTGGCATGGTACACGGAGTGAGTTACCATTTCTCAATTCACTTAAGATGAAGATGTCAATTCTCTTGGGAGTAGCACAAATGAATCTTGGAATCATATTAAGCTACTTCAACGCAAAATTCTTTGGAGACAACATAAATATCTGGTATCAATTTGTTCCCCAGATGATCTTTTTGAACAGCTTATTTGGCTACCTCTCACTTCTCATAATTGTAAAATGGTGCTTGGGCTCTCAAGCTGATTTATATCACATCGTATTATTACTATCTGCTCTTGTTGCTGTTCCATGGATGTTGTTCCCCAGACCTTTTCTCCTGAAGAAGCAACACGAAGAAAGACACCAAGGTCAATCTTACATGTTGCTTCACCTGGCTGATGACCCTCTTGAAAAGGAGCCATATAATGATTCCAATAACCATGAAGAATTTGAGTTCAGTGAGATCTTCGTCCACCAACTTATACATACCATAGAGTTTGTCCTTGGAGCTGTTTCTAATACCGCATCATACTTAAGACTATGGGCACTCAGTTTAGCACATTCAGAATTATCGAGTGTGTTTTATGACAAAGTTCTACTTCTGGCTTGGGGGTTCGACAGTGTTATCATTCTTATTGTTGGGATAGCTGTTTTTATTTTTGCGACGGTTGGTGTTCTTCTGGTGATGGAAACGCTCAGTGCATTCCTACATGCTTTGCGGTTGCACTGGGTTGAGTTTCAGAACAAGTTCTATGAAGGAAATGGTTACAAATTTTACCCTTTTTCATTTGCATTACTTCAAGATGAAGACAATTAA 2433 39.38 MDLLRSEPMQLVQLIIPIESAYLTIAYLGDLGLFQFKDLNTSKSPFQRTYAAQVCHNFFEFPPSPFFLHVVVVCSYFFTKQIKRCGEMARKLRFFKERMMKAGLMLSQKSTKGMDIDLDNLEVKLGEFESELLEINLNNEKLQKSYSELLEYKLVLQKAGEFFDSAQNIAASQNREFSVQYNGEGSIDSPLLLEQEFMTDSTKHVKLGFISGLVQRKKSLAFERILFRATRGNVFLRQSMIEDPITDPGSGEKVEKNVFVIFYSGEIPRNKILKICEAFGANLYAFPDDLSRQPLMVIEVSKKISELKRTIDVGLLHQRNLLQTIDYQYEQWHLLVKKEKAIFHALNMLSIDVTRKCLVAEGWCPVFATNQIQKAIQRATFDSNSQVGAIFQVLQSKEMPPTYFQTNKFTSAFQEIVDAYGVARYQEVNPGVFTVITFPFLFAVMFGDWGHGICLLLSTLYFISREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLVYNEFFSVPFELFGPSAYGCRDPSCRDVTTVGLIKMHDTYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGDNINIWYQFVPQMIFLNSLFGYLSLLIIVKWCLGSQADLYHIVLLLSALVAVPWMLFPRPFLLKKQHEERHQGQSYMLLHLADDPLEKEPYNDSNNHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFDSVIILIVGIAVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGNGYKFYPFSFALLQDEDN 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4434871 4447031 - Bma020858.2 Bma05g00148 82232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00148 810 Pfam V-type ATPase 116kDa subunit family 630 802 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma05g00148 810 Pfam V-type ATPase 116kDa subunit family 78 625 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma05g00148 810 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 631 810 - -
Bma05g00148 810 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 78 633 - -
Bma05g00148 810 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 54 - -
Bma05g00148 810 PANTHER VACUOLAR PROTON ATPASES 1 54 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma05g00148 810 PANTHER VACUOLAR PROTON ATPASES 631 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma05g00148 810 PANTHER VACUOLAR PROTON ATPASES 78 633 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma05g00148 810 Coils Coil 118 145 - -
Bma05g00148 810 PIRSF ATP6V0A1 624 810 IPR026028 GO:0000220|GO:0046961
Bma05g00148 810 PIRSF ATP6V0A1 70 630 IPR026028 GO:0000220|GO:0046961
Bma05g00148 810 PIRSF ATP6V0A1 1 57 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00148 Bma-Chr5:4434871 Bma08g00785 Bma-Chr8:45234372 0 dispersed
Bma07g00127 Bma-Chr7:1993259 Bma05g00148 Bma-Chr5:4434871 0 transposed
Bma03g00566 Bma-Chr3:4689080 Bma05g00148 Bma-Chr5:4434871 2.49E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00148 K02154 - qsu:111995652 1268.06