Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00155 | ATGTCTTCAACGTTCAGCGGCGATGAGACGGCACCTTTTTTTGGCTTCCTTGGCGCTGCCGCAGCCCTCATTTTCTCCTGTATGGGAGCTGCGTACGGAACGGCGAAGAGCGGGGTTGGGGTGGCATCGATGGGTGTGATGAGGCCCGAGCTGGTGATGAAATCGATTGTGCCTGTTGTTATGGCGGGAGTTTTGGGTATCTACGGTCTGATCATTGCTGTGATTATCAGCACAGGGATTAACCCCAAGGCCAAATCCTATTACCTCTTTGATGGCTACGCCCATCTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTCTCTGCTGGCATGGCAATTGGAATCGTAGGAGATGCCGGTGTTAGAGCCAATGCGCAGCAACCGAAGCTGTTTGTTGGGATGATTCTGATTCTCATCTTCGCTGAAGCACTTGCCCTGTATGGCCTCATTGTTGGCATTATCCTCTCTTCACGAGCAGGTCAGTCGAGAGCCGAATAA | 498 | 52.81 | MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4567325 | 4568588 | - | Bma020867.1 | Bma05g00155 | 82239 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00155 | 165 | Gene3D | - | 11 | 162 | IPR035921 | - | |
Bma05g00155 | 165 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 165 | - | - | |
Bma05g00155 | 165 | Pfam | ATP synthase subunit C | 97 | 155 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Bma05g00155 | 165 | Pfam | ATP synthase subunit C | 17 | 76 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Bma05g00155 | 165 | SUPERFAMILY | F1F0 ATP synthase subunit C | 14 | 77 | IPR035921 | - | |
Bma05g00155 | 165 | SUPERFAMILY | F1F0 ATP synthase subunit C | 87 | 156 | IPR035921 | - | |
Bma05g00155 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 134 | 157 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bma05g00155 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 107 | 133 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bma05g00155 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 56 | 80 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bma05g00155 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 30 | 54 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bma05g00155 | 165 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 89 | 156 | - | - | |
Bma05g00155 | 165 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 165 | - | - | |
Bma05g00155 | 165 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 13 | 121 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Bma05g00155 | 165 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 13 | 80 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00735 | Bma05g00155 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma12g00538 | Bma-Chr12:21225905 | Bma05g00155 | Bma-Chr5:4567325 | 4.57E-113 | transposed | |
Bma05g00418 | Bma-Chr5:13219011 | Bma05g00155 | Bma-Chr5:4567325 | 4.57E-113 | transposed | |
Bma01g00735 | Bma-Chr1:6732366 | Bma05g00155 | Bma-Chr5:4567325 | 1.83E-113 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00155 | K02155 | - | cit:102607521 | 288.115 |