Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00168 CTCCTCATTGCATTATTTGATCTGATCTTTCCGGTTTTTTCCATTCTTTTATCTTGTTTTGAAGGTATTTCAGGGGCTTCATTCACCGTAGTAAACAAATGCCAGTTCACTGTATGGCCTGGAGTTCTCGGAAACTCACAGTTGGACACCACCGGCTTCGAACTCCGACAGGGAGACTCCCGCTCTTTCCAGCTCCCACCGGGCTGGTCAGGTAGAGTCTGGGGGAGATCCGGTTGTACATTTGACCAGAGTAGCGGCCAGGGTAGCTGCCTCACCGGCCACTGCGGCTCCAACCAGATTGAATGCAATGGTAACGGAGCGATCCCGCCGGTAACTTTGGCGGAGTTCACGATTGGGTCGGGTACAACCCTGGACTTTTACGATGTGAGCTTAGTCGACGGCTACAATCTCCCCATGATCGTCGAACCCTCAGGCGGGTCGGGTTCGTGTATGTCAACCGGATGCGTGAGCGACTTAAATCTCCGGTGCCCGACAGAGCTGCGATCAGGGGAGGGAACTGCGTGTAGAAGCGCGTGTGAAGCGTTCGGGAATCCTGAATACTGCTGCAGCGGCGCGTACAGTTCACCGGCGACCTGTAAGCCATCGATCTACTCGGCCATTTTCAAATCGGCTTGTCCGAGATCGTATAGCTACGCTTATGACGATGCGACGAGCACATTTACGTGCGGTGGAGCCGATTACAGTATTACATTCTGCCCTTCGTCATCAAGGCAAGCTTCGTTACCTTTCTCCAATTCTCTCCCTTTTCGATTTTCTTTTCTTTAA 786 52.29 LLIALFDLIFPVFSILLSCFEGISGASFTVVNKCQFTVWPGVLGNSQLDTTGFELRQGDSRSFQLPPGWSGRVWGRSGCTFDQSSGQGSCLTGHCGSNQIECNGNGAIPPVTLAEFTIGSGTTLDFYDVSLVDGYNLPMIVEPSGGSGSCMSTGCVSDLNLRCPTELRSGEGTACRSACEAFGNPEYCCSGAYSSPATCKPSIYSAIFKSACPRSYSYAYDDATSTFTCGGADYSITFCPSSSRQASLPFSNSLPFRFSFL 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4778220 4779005 + Bma020885.1 Bma05g00168 82252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00168 261 SUPERFAMILY Osmotin, thaumatin-like protein 27 241 IPR037176 -
Bma05g00168 261 CDD TLP-PA 27 239 - -
Bma05g00168 261 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bma05g00168 261 PRINTS Pathogenesis-related protein signature 51 60 IPR001938 -
Bma05g00168 261 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Bma05g00168 261 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Bma05g00168 261 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Bma05g00168 261 PIRSF PR5 4 258 IPR001938 -
Bma05g00168 261 SMART tha2 28 240 IPR001938 -
Bma05g00168 261 ProSiteProfiles Thaumatin family profile. 25 240 IPR001938 -
Bma05g00168 261 Pfam Thaumatin family 32 240 IPR001938 -
Bma05g00168 261 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 18 249 - -
Bma05g00168 261 PANTHER OS03G0233200 PROTEIN 18 249 IPR001938 -
Bma05g00168 261 Gene3D Thaumatin 26 240 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02374 Bma05g00168 CCT
Bma01g02374 Bma05g00168 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00958 Bma-Chr3:10178704 Bma05g00168 Bma-Chr5:4778220 1.05E-79 dispersed
Bma05g00168 Bma-Chr5:4778220 Bma15g00945 Bma-Chr15:34898244 2.38E-103 dispersed
Bma01g02374 Bma-Chr1:81385966 Bma05g00168 Bma-Chr5:4778220 6.40E-94 wgd
Bma01g00724 Bma-Chr1:6630585 Bma05g00168 Bma-Chr5:4778220 2.16E-41 wgd
Bma05g00168 Bma-Chr5:4778220 Bma06g00093 Bma-Chr6:1413130 7.88E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00168 - - jre:109003887 385.571