Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00184 ATGTCAAGTTGTTTTCATGTTAATTGTTTTGATTTTTGTAGGGAAAATGGGAAAAACGATGTTACAATAAAGGTCCTATATTGTGGAATATGTCACACTGATCTCCACCAAGCAAGAAACGACTGGGGAATCACCATGTATCCTATAGTTCCAGGGCATGAGATTACTGGGGTGATAACGAAGGTGGGACAACACGTGAAGAGATTCAAAGTAGGAGATAAGGTAGGAGTTGGGTGTATAGCAGCGTCGTGTTTGGATTGCGAGTTCTGCGAGGAATCCAAAGAGAATTACTGCGAAAAGCTTCAGTTCACCTTCAATGGCGTCTTCTGGGATGGTAGCGTCACTTACGGCGGCTACTCAAAAATGCTAGTGGCAGATCAGAGGTATGTGGTGCGAATACCATCGGGCCTGAGAATGGATGCGGCGGCGCCATTGCTGTGCGCAGGAATAACAGTGTTCAGCCCCATGAAAGAGCACAAACTGTTCGAATCGACGGGGAAGAAGATAGGGGTGGTTGGGCTTGGAGGGCTGGGACACGTGGCCGTGAAATTTGGGAAGGCTTTTGGCCACCATGTGACTGTGATAAGCACCTCTCCTTCCAAAGAAAAACAGGCCAAGGAACACCTTGGTGCTGACAATTTCATTCTCAGCACAAATCCTCAGCAAATGCAGGAGGGGGCGAGGAGCTTGGACTTTGTATTGGACACAGTGTCAGGAAAGCATTCTATAGGCCCAATCTTGGAGCTGCTCAAAGTGAACGGAACGTTAGTGATGGTGGGCGCGCCGGAACACCCCGTGGAACTGCCGTCCTTCCCGCTCATATTTGGAAAGAGAGCAGTGAAAGGCAGCGTGATCGGAGGGATGAAGGAGACGCAGGAGATGATGGATTTGTGCGGTAAACTCGACATTACGTGCGATGTAGAGGTGATCAAACCAGCCCACATCAACCAGGCTTTCGACCGTCTTGCTAAGAACGACGTGCGCTACCGCTTTGTCATCGACATTGCTGATGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTACAATCTCTTCCAGGCTTTGA 1074 50.74 MSSCFHVNCFDFCRENGKNDVTIKVLYCGICHTDLHQARNDWGITMYPIVPGHEITGVITKVGQHVKRFKVGDKVGVGCIAASCLDCEFCEESKENYCEKLQFTFNGVFWDGSVTYGGYSKMLVADQRYVVRIPSGLRMDAAAPLLCAGITVFSPMKEHKLFESTGKKIGVVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKQAKEHLGADNFILSTNPQQMQEGARSLDFVLDTVSGKHSIGPILELLKVNGTLVMVGAPEHPVELPSFPLIFGKRAVKGSVIGGMKETQEMMDLCGKLDITCDVEVIKPAHINQAFDRLAKNDVRYRFVIDIADAAAAAAAAAAAAAATISSRL 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5157125 5158540 + Bma020910.1 Bma05g00184 82268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00184 357 Gene3D - 14 334 - -
Bma05g00184 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 7 339 - -
Bma05g00184 357 PANTHER ALDEHYDE REDUCTASE 7 339 - -
Bma05g00184 357 Pfam Alcohol dehydrogenase GroES-like domain 19 132 IPR013154 -
Bma05g00184 357 CDD CAD1 14 334 - -
Bma05g00184 357 SMART PKS_ER_names_mod 2 333 IPR020843 GO:0016491
Bma05g00184 357 Pfam Zinc-binding dehydrogenase 176 297 IPR013149 -
Bma05g00184 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 138 300 IPR036291 -
Bma05g00184 357 SUPERFAMILY GroES-like 15 159 IPR011032 -
Bma05g00184 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 52 66 IPR002328 GO:0008270|GO:0016491
Bma05g00184 357 Gene3D - 148 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00184 Bma-Chr5:5157125 Bma06g00531 Bma-Chr6:27263080 2.21E-131 dispersed
Bma05g00184 Bma-Chr5:5157125 Bma03g01039 Bma-Chr3:12141113 3.90E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00184 K00083 - tcc:18591600 536.954