Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00190 ATGGCGGAGGAGACGACCGAGGGTTTGGTTTATCTTCATGGGGACCTCCATTTGAAAATCATCGAGGCTCGGAGCTTGCCTAACATGGACTTGCTCTCTGAGCGTTTTCGTCGATTTTTTTCGACGTTCAACACGTGTGTTGCTCCATTTTCGAAAAGGAGTCAACACCATCGCCACCACAAAATCATCACCAGCGATCCTTACGTAACCGTCTGCCTTGCAGGAGCTACAGTTGCTCGCACTCGAGTGATTTCAAATTCCCAGAATCCTATTTGGAATGAGAGCTTCATTATTCCTCTGGCTCATCCAGTCTCGCTGGTCGAGTTCCACGTGAAAGACAACGACGTGTTTGGTGCGGAGATGATCGGTACAGCCACAGTCTCTGTGCAGAGAATCATTTCTGGTAAACCCATAAATGACTGGTTTCCAATAATAAACGCATTCGGGAAACCACCGAAGCCAGATTCAGCTGTTCGTCTGGAAATGACATTCACCAAATGCAACGATAACCCAATCTACAGATACGGAATCGCAACCGATCCGCTTCATTTTGGGGTTCGTAATTGCTATTTTCCTGTACGGCCAGGGGGTTCTGTGACGCTTTATCAGGACGCTCACATTCCGGATTCAGCTTTGGGGAAGATTGAATTGGATAGTAAGACCGAGTTTCAGCACGAGAATTGTTGGGAGGATATTTGCCATGCAATTTTGGAGGCTCATCATTTAGTCTACATCGTTGGCTGGTCGATTTATCATAAAGTGAAGCTCGTGAGAGAGCCTACGAAACCGTTGCCCAGCGGTGGGAATTTGAACTTGGGAGATTTGCTCAAGTACAAGTCCCAAGAAGGAGTGCGGGTTTTGTTGTTGGTTTGGGACGATAAGACTTCGCATAACAAATTTTTCATCAATACGGCTGGAGTAATGCAAACTCATGATGAAGAGACTCGGAAGTTTTTCAAACACTCCTCTGTCACATGTGTGCTGTCACCTCGATATGCCAGCAGTAAACTCAGCATTTTTAAGCAACAGGCACGCTTTGTACCATTGACCATGGACTATGTGCTGAGTGTTTTATCACTTATATTTCAGGTCGTGGGAACCCTCTTTTCACATCACCAGAAATGTGTGATTGTAGATACACAAGCATCTGGAAATAATCGGAAAATAACTGCTTTCCTCGGAGGTCTTGATCTTTGTGATGGTCGCTATGATACTCCTGAACACAGACTATTTCGTGATCTTGATACTGTGTTTCAGAATGATTATCATAATCCGACATTGCCAGGTGCACCCAATGGTCCCAGGCAGCCTTGGCACGATTTACATTGCAAAATTGAAGGCCCTGCTGCATATGATGTGCTTACAAATTTTGAGCAACGATGGAGAAAAGCCACAAAATGGTCAGAAATAGGACAGCGTTTCAAAAGGGTGTCTCACTGGCACGATGATGCTTTAATAAAGTTGGAACGTATTTCATGGATACTAAGTCCTTCCTCATCGGTTCCAAATGATGATCCATTACTGTGGGTTTCCAGTGAAGATGATCCTGAAAATTGGCATGTTCAGGTTTTCCGCTCGATTGACTCGGGATCCTTGAAAGGATTTCCTAAAGATGTTTATCAAGCTGAAATTAAGAATCTAGTCTGTGCAAAAAATTTGGTCATAGACAAGAGCATTCAAACTGCATACATCCAAGCAATAAGATCTGCTCAACGCTTCATATACATTGAAAACCAGTATTTCCTTGGATCATCATACGCATGGCCTTCTTACAAAAACGCAGGTGCCGATAATCTGATTCCCATGGAGTTGGCATTAAAGATTACCAGTAAGATTAAAGCCAATGAAAGATTCTCTGTTTATGTGGTAATACCAATGTGGCCCGAGGGTCTTCCATCATCCGCTGCTGTGCAAGAAATTCTCTATTGGCAGGGACAGACAATGCAAATGATGTATAGTATCATCGCACGACAACTTAAATCCATGAAGATGGAGAACTCACATCCACTAGAATACTTGAATTTTTACTGTCTTGGCAATAGAGAAGAAGTGCCCCAGGAGTTGTCAGGCTCAAGTAATGTCTCTTCAAAGAGTGGAGACCCGGCCTCAGATTCAGAGAGGTTTCGAAGGTTTATGATCTATGTACATGCCAAGGGAATGGTTGTTGATGATGAGTATGTCATCTTAGGGTCTGCCAATATAAATCAGCGATCAATGGCTGGCTCAAGAGACACGGAGATAGCCATGGGCGCATATCAACCTCATCACACATGGGGTAAGAAGCAGCGACATCCACATGGGCAGGTTTATGGGTACAGAATGTCCTTGTGGGCAGAACATACGGGGATGATTGATGATGACTTCAAGGAACCTGAAAGTTTGGCTTGTGTGAGGAGTGTAAACAAGATAGCTGAAGATAACTGGAGCAAGTACACTGCCAGGGAATTCATGCCATTACAGGGACACCTTCTCAAATACCCGCTGGATGTGGATGCGAATGGCAAAGTGCGGCCGCTTACCGGACAAGAATCCTTCCCCGATGTCGGTGGTAAGGTGCTCGGAACCCATACTACCCTCCCTGATGCTCTAACAACGTGA 2598 44.69 MAEETTEGLVYLHGDLHLKIIEARSLPNMDLLSERFRRFFSTFNTCVAPFSKRSQHHRHHKIITSDPYVTVCLAGATVARTRVISNSQNPIWNESFIIPLAHPVSLVEFHVKDNDVFGAEMIGTATVSVQRIISGKPINDWFPIINAFGKPPKPDSAVRLEMTFTKCNDNPIYRYGIATDPLHFGVRNCYFPVRPGGSVTLYQDAHIPDSALGKIELDSKTEFQHENCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGDLLKYKSQEGVRVLLLVWDDKTSHNKFFINTAGVMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQARFVPLTMDYVLSVLSLIFQVVGTLFSHHQKCVIVDTQASGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFQNDYHNPTLPGAPNGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSEIGQRFKRVSHWHDDALIKLERISWILSPSSSVPNDDPLLWVSSEDDPENWHVQVFRSIDSGSLKGFPKDVYQAEIKNLVCAKNLVIDKSIQTAYIQAIRSAQRFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKITSKIKANERFSVYVVIPMWPEGLPSSAAVQEILYWQGQTMQMMYSIIARQLKSMKMENSHPLEYLNFYCLGNREEVPQELSGSSNVSSKSGDPASDSERFRRFMIYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWGKKQRHPHGQVYGYRMSLWAEHTGMIDDDFKEPESLACVRSVNKIAEDNWSKYTAREFMPLQGHLLKYPLDVDANGKVRPLTGQESFPDVGGKVLGTHTTLPDALTT 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5241623 5245710 - Bma020917.1 Bma05g00190 82274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00190 865 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 167 IPR035892 -
Bma05g00190 865 Gene3D C2 domain 12 172 IPR035892 -
Bma05g00190 865 Pfam C2 domain 14 144 IPR000008 -
Bma05g00190 865 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Bma05g00190 865 PANTHER PHOSPHOLIPASE D 9 864 - -
Bma05g00190 865 PIRSF PLD_plant 1 865 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bma05g00190 865 Pfam Phospholipase D Active site motif 712 738 IPR001736 GO:0003824
Bma05g00190 865 Pfam Phospholipase D Active site motif 368 402 IPR001736 GO:0003824
Bma05g00190 865 Gene3D Endonuclease Chain A 535 757 - -
Bma05g00190 865 Pfam Phospholipase D C terminal 785 855 IPR024632 -
Bma05g00190 865 PANTHER PHOSPHOLIPASE D 9 864 IPR015679 -
Bma05g00190 865 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 367 402 IPR001736 GO:0003824
Bma05g00190 865 SMART pld_4 367 402 IPR001736 GO:0003824
Bma05g00190 865 SMART pld_4 711 738 IPR001736 GO:0003824
Bma05g00190 865 SUPERFAMILY Phospholipase D/nuclease 556 796 - -
Bma05g00190 865 SUPERFAMILY Phospholipase D/nuclease 224 471 - -
Bma05g00190 865 CDD C2_plant_PLD 8 165 - -
Bma05g00190 865 Gene3D Endonuclease Chain A 212 484 - -
Bma05g00190 865 SMART C2_3c 15 141 IPR000008 -
Bma05g00190 865 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 711 738 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00178 Bma-Chr5:5051076 Bma05g00190 Bma-Chr5:5241623 0 dispersed
Bma05g00190 Bma-Chr5:5241623 Bma05g01121 Bma-Chr5:50033692 0 dispersed
Bma05g00190 Bma-Chr5:5241623 Bma09g00903 Bma-Chr9:48415787 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00190 K01115 - jre:108981014 1456.43