Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00195 ATGGAGGAGGTCGAACTGCAGGGTGAAATTAAGGACGAAATTGCTGAAATTGCCCCTTTTGATCCTACAAAGAAGAAGAAGAAAAAGAAGGTTGTCATACAGGACTCTGCTGATGACTCTGTGGACAAATTGGCTGAGAAAACAGAGAGTTTAAGTGTTTCGGATGGGCTTGAAAGTGCATTTTCTGGCTTAAAAAAGAAAAAGAAAAAGCCTATTGAAACCGGTTTTATGAATGACGAGGCTGGAGATATAGAGGAAGATTTGGATGAACATGCTGTAGAAAACGAGGAAGCAGAAGGAATTGTTTTACAGGCACGTTATCCATGGGAAGGGAGTAATCGCGAATATGAATATGAGGAGCTTCTTGGCAGGGTATTCAATATTCTCCGGGAGAATAATCCAGAACTGGCGGGCGATAGGCGTAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGAACAAAGAAAACAGTTTTTGTGAACTTTATGGATCTATGCAAATCGATGCATCGACAGCCGGACCATGTCATGACTTTCCTTTTGGCTGAATTGGGGACAAGTGGATCACTTGATGGGCAGCAAAGATTAGTTGTGAAAGGAAGATTTGCACCTAAAAACTTCGAAGGAATTCTGCGTCGTTATATTAATGATTATGTGATTTGCTTTGGGTGCAAAAGTCCAGACACTATACTTTCAAAGGAGAACCGGCTTTTCTTCCTTAGGTGTGAGAAGTGTGGTTCTGGACGATCGGTTGCTCCAATCAAAGCTGGATTTGTTGCTCGTGTTGGTCGCAGAAATGCCGGAACATAA 813 42.68 MEEVELQGEIKDEIAEIAPFDPTKKKKKKKVVIQDSADDSVDKLAEKTESLSVSDGLESAFSGLKKKKKKPIETGFMNDEAGDIEEDLDEHAVENEEAEGIVLQARYPWEGSNREYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKSMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5420292 5424131 - Bma020928.1 Bma05g00195 82279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00195 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743|GO:0006413
Bma05g00195 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 11 267 IPR045196 GO:0003743|GO:0006413
Bma05g00195 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 116 222 IPR016189 GO:0003743|GO:0006413
Bma05g00195 270 Gene3D - 113 255 - -
Bma05g00195 270 PANTHER BNAA02G05130D PROTEIN 11 267 - -
Bma05g00195 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743|GO:0006413
Bma05g00195 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00861 Bma-Chr1:8097238 Bma05g00195 Bma-Chr5:5420292 1.32E-08 dispersed
Bma05g00195 Bma-Chr5:5420292 Bma11g00051 Bma-Chr11:610200 4.14E-156 dispersed
Bma05g00195 Bma-Chr5:5420292 Bma02g00261 Bma-Chr2:2745855 7.93E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00195 K03238 - zju:107411571 468.774