Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00204 ATGGCGGAAGCTAATCAGAAGCTGATAGTTGATCGGAGAAGTGGATTCTGCAAAGCCAATTCCGTCTATTACAGCAAACGTAAGCCTATTCCGCTACCGCCGAACAGTTCCCTCGATGTCACCACTTTTATCTCTTCACGGGCCCACAATGGGAAGATCGCCTTCATCGACGCCTCCACCGGCCAGTACCTGACATTTACAGAGCTCTGGCGAAGCGTCGATTCGGTCTCGGCGAGTCTTTCCGAAATGGGTATTGGAAAGGGAGACGTGGTTCTTCTCCTCTCCCCCAACTCTATCTTCTTCCCAGTCGTCTGCCTTGCAATCATGTCTCTCGGCGCGATTATCACCACCACTAATCCCCTTAATACCCCTCGCGAAATAGCCAAGCAAATCGCGGATTCCAAACCAGTTCTGGCTTTCACCACTCACCAACTCGTCCCAAAACTTGCCGATTCTAATCTTCCCATCGTCCTAATCGACGGGCATACCGCCCAAGTGGAAGCAAAAATTGTGTCCACTTTGGGAGAAATGATGAAGAAAGATCCGAGTATGGTCCGAGTGAAGAGCCGAGTCAACCAGGATGATACGGCGACCTTACTTTACTCGTCCGGCACTACAGGAGCCAGTAAAGGAGTGCTTTCCTCGCACAAAAATCTTATAGCCATGGTTCAAATTGTTCTGAACCGATTTCGTCTGGAAGAAGGAGATCAGACTTTCATCTGCACCGTTCCTATGTTCCATATCTACGGTCTAGCCGTTTTTGCGACGGGTCTGCTCGCGTCCGGATCTACAATAATTGTGCTGTCGAAATTCGAAATCCATGATATGCTGTCGGCGATCGGGAAGTACAAGGCGACGTACCTCCCGTTGGTGCCTCCGATACTGGTGGCGCTAATGAGCAACGCCGATCAGATAAAGCCAAAGTATGATTTGAGCTCGTTGCAATGGGTTTTATCAGGTGGAGCTCCGCTGAGCAAGGAGGTGATAGAGGGATTCTTGGAGAAGTTTCCGACGATCACGATTCTTCAAGGGTACGGTCTAACCGAATCAGCCGGCGTCGGAGCTTCAACGGACTCGATGGAGGAGAGTCGGAGATACGGGACGGCTGGGATGTTGTCACCGAACGTGGAGGCCATGATAGTGAACCCAGAATCCGGTGAGGCTTTGGCGGAGAATCAGACGGGTGAGCTTTGGCTCAGAGGTCCTACCATCATGAAAGGTTATTTCTGCAATGAAGAGGCCACTTCAACTACCATTGATTCGGCAGGGTGGTTAAGAACAGGCGATCTCTGCTATATCGATGAAGATGGATTTATTTTTGTGGTGGATAGATTGAAAGAACTCATCAAATACAAGGGCTATCAGGTTGCTCCCGCAGAACTGGAGGCATTGTTGATTACCCATCCCCAAATTTCCGATGCTGCTGTCATTCCGTTTCCTGATAAAGAGGTGGGGCAATATCCCATGGCGTATGTGGTGAGGAAGCCTGGAAACGGTATTTCAGAGAGGGGAGTCATGGATTTTGTAGCCAAACTGGTGGCGCCGTACAAGAGGGTTAGAAGGGTGGCGTTTGTGGAATCCATTCCCAAAAATGCTTCCGGCAAGATTCTGAGGAAGGACCTCATAAAGCTAGCCACCTCCAAGCTTTGA 1650 49.94 MAEANQKLIVDRRSGFCKANSVYYSKRKPIPLPPNSSLDVTTFISSRAHNGKIAFIDASTGQYLTFTELWRSVDSVSASLSEMGIGKGDVVLLLSPNSIFFPVVCLAIMSLGAIITTTNPLNTPREIAKQIADSKPVLAFTTHQLVPKLADSNLPIVLIDGHTAQVEAKIVSTLGEMMKKDPSMVRVKSRVNQDDTATLLYSSGTTGASKGVLSSHKNLIAMVQIVLNRFRLEEGDQTFICTVPMFHIYGLAVFATGLLASGSTIIVLSKFEIHDMLSAIGKYKATYLPLVPPILVALMSNADQIKPKYDLSSLQWVLSGGAPLSKEVIEGFLEKFPTITILQGYGLTESAGVGASTDSMEESRRYGTAGMLSPNVEAMIVNPESGEALAENQTGELWLRGPTIMKGYFCNEEATSTTIDSAGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLITHPQISDAAVIPFPDKEVGQYPMAYVVRKPGNGISERGVMDFVAKLVAPYKRVRRVAFVESIPKNASGKILRKDLIKLATSKL 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5710160 5712143 + Bma020939.1 Bma05g00204 82288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00204 549 Gene3D - 447 548 IPR045851 -
Bma05g00204 549 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Bma05g00204 549 Pfam AMP-binding enzyme 47 451 IPR000873 -
Bma05g00204 549 Gene3D - 20 446 IPR042099 -
Bma05g00204 549 PANTHER BNAA06G14440D PROTEIN 10 548 - -
Bma05g00204 549 CDD 4CL 32 541 - -
Bma05g00204 549 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Bma05g00204 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 548 - -
Bma05g00204 549 SUPERFAMILY Acetyl-CoA synthetase-like 46 547 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00204 Bma-Chr5:5710160 Bma06g00250 Bma-Chr6:3438898 1.84E-164 dispersed
Bma05g01309 Bma-Chr5:52346537 Bma05g00204 Bma-Chr5:5710160 2.39E-20 dispersed
Bma05g00204 Bma-Chr5:5710160 Bma07g01477 Bma-Chr7:50405268 1.70E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00204 K10526 - zju:107419834 865.529