Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00240 | ATGGCCAACAAGCTTTCAGATGAATTAACCCAGAAAACTGGCATGTTTGGTCTCATGGTCTGGGAAGTAATCGGAATTGCTGTCGGGTTGTTCATTGTAGTCATCCTATCTGTACTCTCATTATGTCTTACGTCGAGAAAGAAGTCAAGGAGAGCTAGGGACAAAGTAACGCTTTGTCAAATCCCTGCTGTTTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGATGAATTTGTTCCACGCGATGGAATTCTTCTCACCATTCATGACAAATCAAATGAAAAAGGTTCAGACAAGGTTTTGGTCCACGTTGATGTGGGGAAGATGAAGAACGGAGACAGTGGCAGTCAGTCAGGTTCGTTTCATCAGTTCGATAAAGATGGTGCTGGATCTCAATCTGGAGAAGAAGGAAATTCTGGCAAGGTCACCATATACAGACCCTCTTCTTCTTGTTCTTCCTATCCGATTACTGCTCCTTCCCCTCTTTCCGGCCTGCCCGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGAGATCTTGAGGTTGCTACAAACCGATTCTCCAAAGAAAATGTCCTCGGGGAGGGCGGTTATGGGGTTGTTTATCAGGGGCGTCTAATCAATGGAACTGCAGTGGCTGTGAAAAGGATTCTCAATAATCTGGGTCAGGCGGAGAAAGAATTTCGAGTTGAAGTAGAAGCCATTGGTCATGTGCGCCATAAGAATTTGGTTCGTCTTCTGGGTTATTGCATTGAAGGAACTCACAGGATGCTGGTTTATGAGTATGTCAACAATGGAAACTTAGAGCAATGGCTTCACGGAGCTATGCGTCAGCATGGGTACCTTACTTGGGAGGCACGGATGAAAATTCTACTTGGTACAGCAAAAGCGCTTGCATATTTGCATGAGGCTATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTGATTGACGACGACTTCAATTCGAAGGTATCTGACTTCGGCCTGGCCAAGTTGCTGGGTGCTGGTAAAAGTCATGTTACAACTCGAGTGATGGGAACCTTCGGATACGTAGCTCCTGAATATGCAAATACTGGTCTTTTGAATGAGAAGAGCGATGTCTATAGCTTTGGGGTTTTGCTTCTCGAAACAATTACCGGAAGAGATCCTGTAGATTATGGACGCCCTTCCCAGGAGGTAAATCTAGTAGATTGGTTGAAAATGATGGTTGGAAGCAGACGATCGGAAGAAGTTGTTGATCCAAACATGGAGGTAAGGCCATCCACAAGAGCTCTAAAACGAGCACTTTTGACCGCTTTGAGGTGTGTCGACCCTGATTCTGAAAAGAGACCAAAGATGGGTCAAATCGTGCGCATGCTCGAGTCGGAAGAGTATCCACTACCTCGAGAGGATCGAAGGCAGAGAAGAACTCAGGCGAGCAGCACCGACATTGAATCGCAGAGGGAGTATTCCGATACAGACCGGAGCGAAAATCCGGCATCGCGATCGGAAAGCAGGCGGGACCAGCATATGTAA | 1545 | 46.15 | MANKLSDELTQKTGMFGLMVWEVIGIAVGLFIVVILSVLSLCLTSRKKSRRARDKVTLCQIPAVSKEIKEVRVEQLSADEFVPRDGILLTIHDKSNEKGSDKVLVHVDVGKMKNGDSGSQSGSFHQFDKDGAGSQSGEEGNSGKVTIYRPSSSCSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYQGRLINGTAVAVKRILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNSKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLETITGRDPVDYGRPSQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRQRRTQASSTDIESQREYSDTDRSENPASRSESRRDQHM | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6529823 | 6532617 | - | Bma020992.1 | Bma05g00240 | 82324 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00240 | 514 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 2 | 512 | - | - | |
Bma05g00240 | 514 | MobiDBLite | consensus disorder prediction | 490 | 514 | - | - | |
Bma05g00240 | 514 | SUPERFAMILY | Protein kinase-like (PK-like) | 176 | 476 | IPR011009 | - | |
Bma05g00240 | 514 | MobiDBLite | consensus disorder prediction | 114 | 147 | - | - | |
Bma05g00240 | 514 | CDD | STKc_IRAK | 198 | 464 | - | - | |
Bma05g00240 | 514 | PANTHER | OS01G0323000 PROTEIN | 2 | 512 | - | - | |
Bma05g00240 | 514 | MobiDBLite | consensus disorder prediction | 464 | 514 | - | - | |
Bma05g00240 | 514 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 314 | 326 | IPR008271 | GO:0004672|GO:0006468 | |
Bma05g00240 | 514 | MobiDBLite | consensus disorder prediction | 464 | 482 | - | - | |
Bma05g00240 | 514 | ProSiteProfiles | Protein kinase domain profile. | 192 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma05g00240 | 514 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 480 | - | - | |
Bma05g00240 | 514 | Pfam | Protein kinase domain | 193 | 461 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma05g00240 | 514 | ProSitePatterns | Protein kinases ATP-binding region signature. | 198 | 220 | IPR017441 | GO:0005524 | |
Bma05g00240 | 514 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 267 | - | - | |
Bma05g00240 | 514 | SMART | serkin_6 | 192 | 463 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00606 | Bma-Chr1:5491285 | Bma05g00240 | Bma-Chr5:6529823 | 0 | dispersed | |
Bma03g01344 | Bma-Chr3:28445738 | Bma05g00240 | Bma-Chr5:6529823 | 0 | dispersed | |
Bma05g00240 | Bma-Chr5:6529823 | Bma11g00819 | Bma-Chr11:25499778 | 3.98E-174 | dispersed | |
Bma05g00240 | Bma-Chr5:6529823 | Bma15g00184 | Bma-Chr15:1925429 | 3.37E-95 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66490 | PF00069 | Pkinase | 2.90E-48 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00240 | - | - | jre:109008584 | 885.945 |