Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00263 | ATGGCTCAGAGTGGCGACAATGTTATTGGAGTTGATAACACATTTAGGAGGAAATTCGATCGAGAGGAGTATCTAGAACGTGCTCGCGAGCGCGAAAAGCAGGAGTCTGAAGGACGGTCTAAATCCAAATCAAAAGGTCCACCAGTTCAGAGGAAACCTTTGAAACACAGGGATTATGAAGTAGACCTTCAATCACGCCTGGGGAAAACTCAGGTTGTTACTCCAGTAGCGCCTCTAAGCCAACAGGCAGGATATTTTTGTTCAGTTTGTGAATGCGTTGTAAAGGATTCAGCAAACTACTTGGACCATATCAATGGAAAGAAACATCAAAGAGCACTGGGTATGTCTATGCGAGTAGAACGAGCATCTCTTCAGCAGGTACAAAAGCGGTTTGAAAATCTTAAGAAGAGAAAAATACCTGGCAGCTTTACAGAGCAAGATCTTGATGAAAGGATCTTAAAACAACAGCAAGAAGAGGAGGAAAGGAAGCGACAGCGCAGAGAAAGGAAGAAAGAAAAGAAGAAGGAGAAGGCTGCAGAGGACGAAACTGAAGTAGATCCTGATGTTGCTGCCATGATGGGATTTGGAGGTTTCAGTTCATCAAAAAAGTGA | 612 | 43.46 | MAQSGDNVIGVDNTFRRKFDREEYLERAREREKQESEGRSKSKSKGPPVQRKPLKHRDYEVDLQSRLGKTQVVTPVAPLSQQAGYFCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQKRFENLKKRKIPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAAEDETEVDPDVAAMMGFGGFSSSKK | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7304979 | 7401489 | - | Bma021029.1 | Bma05g00263 | 82347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00263 | 203 | PANTHER | ZINC FINGER MATRIN-TYPE PROTEIN 2 | 8 | 203 | IPR040107 | GO:0000398|GO:0005681 | |
Bma05g00263 | 203 | Coils | Coil | 150 | 184 | - | - | |
Bma05g00263 | 203 | MobiDBLite | consensus disorder prediction | 22 | 44 | - | - | |
Bma05g00263 | 203 | MobiDBLite | consensus disorder prediction | 22 | 56 | - | - | |
Bma05g00263 | 203 | Pfam | Zinc-finger of C2H2 type | 85 | 109 | - | - | |
Bma05g00263 | 203 | SMART | ZnF_U1_5 | 82 | 116 | IPR003604 | GO:0003676|GO:0008270 | |
Bma05g00263 | 203 | Gene3D | Classic Zinc Finger | 79 | 117 | - | - | |
Bma05g00263 | 203 | MobiDBLite | consensus disorder prediction | 145 | 166 | - | - | |
Bma05g00263 | 203 | SUPERFAMILY | beta-beta-alpha zinc fingers | 81 | 122 | IPR036236 | - | |
Bma05g00263 | 203 | Coils | Coil | 117 | 137 | - | - | |
Bma05g00263 | 203 | MobiDBLite | consensus disorder prediction | 145 | 203 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00609 | Bma05g00263 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00609 | Bma-Chr1:5517308 | Bma05g00263 | Bma-Chr5:7304979 | 3.07E-111 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00263 | K12848 | - | jre:108991020 | 295.434 |